Part of scaffold_637 (Scaffold)

For more information consult the page for scaffold_637 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBE3A ENSTTRG00000005991 (Bottlenosed dolphin)

Gene Details

ubiquitin protein ligase E3A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005662, Bottlenosed dolphin)

Protein Percentage 99.77%
cDNA percentage 99.34%
Ka/Ks Ratio 0.04818 (Ka = 0.0011, Ks = 0.022)

UBE3A ENSBTAG00000002487 (Cow)

Gene Details

ubiquitin-protein ligase E3A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000046597, Cow)

Protein Percentage 99.54%
cDNA percentage 97.56%
Ka/Ks Ratio 0.0235 (Ka = 0.0021, Ks = 0.0902)

UBE3A  (Minke Whale)

Gene Details

ubiquitin protein ligase E3A

External Links

Gene match (Identifier: BACU007870, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.54%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0181)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2628 bp    Location:735773..799187   Strand:+
>bmy_11592
ATGGCCACAGCTTGTAAAAGATCATCAGGAGAACCTCAGTCTGACGACATTGAAGCTAGCCGAATGAAGCGAGCAGCTGCAAAACATCTAATAGAACGCTACTACCACCAGTTAACTGAGGGCTGTGGAAATGAGGCCTGCACGAATGAGTTTTGTGCTTCCTGTCCAACTTTTCGTCGTATGGATAACAATGCAGCAGCTATTAAAGCCCTTGAGCTTTATAAGATTAATGCAAAACTCTGTGATCCTCATCCCTCCAAGAAAGGAGCAAGCTCAGCTTACCTTGAAAACTCTAAAGGTGCCCCTAACAACTGCTCTGACGTGAAAATGAACAAGAAAGATGGACAAGGAGCAAGAGATGATTTTAAAGATGTGACTTACCTAACAGAAGAGACGGTATATGAAATTCTAGAATTATGTAGAGAGAGGGAGGATTATTCCCCTTTAATTCGTGTTATTGGAAGAGTTTTTTCTAGTGCTGAGGCATTGGTACAAAGCTTTCGGAAAGTCAAACAACACACCAAGGAAGAACTGAAATCTCTTCAAGGAAAGGATGAAGACAAAGATGAAGATGAAAAGGAAAAAGCTGCATGTTCTGCTGCAGCTATGGAAGAAGATTCAGAAGCATCTTCCTCAAGGATAAGTGATAGCTCACAAGGAGATAACAACTTACAAAAATTAGGTCCTGATGATGTGTCTGTGGATATTGAGGCCATTAGAAGGGTCTATACCAGATTGCTCTCTAATGAAAAAATAGAAACTGCCTTTCTCAATGCACTTGTGTATTTGTCACCTAATGTGGAATGTGACTTGACATATCACAATGTATACTCCCGAGATCCTAATTATCTGAATTTATTCATTATTGTCATGGAGAATAGAAATCTCCACAGTCCTGAATATCTGGAAATGGCTTTGCCACTGTTTTGCAAAGCAATGAGTAAGTTACCCCTTGCAGCCCAAGGAAAACTGGTCAGACTGTGGTCTAAATACAGTGCAGACCAGATTCGGAGAATGATGGAAACGTTTCAGCAACTTATTACATACAAAGTCATAAGCACTGACTTTAACAATCGAAATCTAGTGAACGATGATGATGCTATTGTTGCTGCTTCCAAGTGCTTGAAAATGGTTTACTATGCAAATGTAGTGGGAGGGGAAGTGGACACAAATCATAATGAAGAAGATGATGAAGAGCCCATTCCTGAGTCCAGTGAATTGACACTTCAGGAGCTATTGGGAGAAGAAAGAAGGAACAAGAAAGGTCCTCGAGTGGACCCACTAGAAACTGAACTTGCTGTTAAAACTCTGGATTGTCGAAAACCACTTATCCCTTTTGAAGAGTTTATTAATGAACCACTGAATGATGTTCTAGAAATGGATAAAGATTATACTTTTTTCAAAGTAGAAACAGAGAACAAATTCTCTTTTATGACATGTCCCTTTATATTGAATGCTGTCACAAAGAATTTGGGATTGTATTATGACAATAGAATTCGCATGTACAGTGAACGAAGAATCACTGTTCTCTACAGCTTAGTTCAAGGACAGCAGTTGAATCCATATTTGAGACTCAAAGTCAGACGTGACCATATCATAGATGATGCACTCGTCCGGCTAGAGATGATCGCTATGGAAAATCCTGCAGACTTGAAGAAACAGTTGTATGTGGAATTTGAAGGAGAACAAGGAGTTGATGAGGGAGGTGTTTCCAAAGAATTTTTTCAGCTGGTTGTGGAGGAAATCTTCAATCCAGATATCGGTATGTTCACATATGATGAATCTACAAAATTGTTTTGGTTTAATCCATCCTCTTTTGAAACTGAGGGTCAGTTCACTCTGATTGGCATAGTACTGGGTCTGGCTATTTACAATAACTGTATACTGGATGTACATTTTCCCATGGTTGTCTACAGGAAGCTAATGGGGAAAAAAGGAACTTTTCTTGACCTGGGAGACTCTCACCCTGTTCTATATCAGAGTTTAAAAGACTTATTGGAGTATGAAGGGAATGTGGAAGATGATATGATGATCACTTTCCAGATATCTCAGACGGATCTTTTTGGTAATCCAATGATGTATGATCTAAAGGAAAATGGTGATAAAATTCCAATTACAAATGAAAACAGGAAGGAATTTGTCAATCTCTATTCTGACTACATTCTCAATAAATCAGTAGAAAAACAGTTCAAGGCTTTTCGGAGAGGTTTTCATATGGTGACCAATGAATCTCCTTTAAAGTACTTATTCAGACCAGAGGAAATTGAATTGCTTATATGTGGAAGCCGGAATCTAGATTTCCAAGCACTAGAAGAAACTACAGAATATGAYGGTGGCTATACCAGGGACTCTGTTGTGATTAGGGAGTTCTGGGAAATCGTTCATTCATTTACAGATGAGCAGAAAAGACTCTTCTTGCAGTTTACAACGGGCACAGACAGGGCACCTGTGGGCGGACTAGGAAAATTAAAGATGATTATAGCCAAAAATGGCCCAGACACAGAAAGGTTACCTACATCTCATACTTGCTTTAATGTCCTTTTACTTCCGGAATATTCAAGCAAAGAAAAACTTAAAGAGAGATTGTTGAAGGCCATCACTTATGCCAAAGGATTTGGCATGCTGTAA

Related Sequences

bmy_11592T0 Protein

Length: 876 aa      View alignments
>bmy_11592T0
MATACKRSSGEPQSDDIEASRMKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFRRMDNNAAAIKALELYKINAKLCDPHPSKKGASSAYLENSKGAPNNCSDVKMNKKDGQGARDDFKDVTYLTEETVYEILELCREREDYSPLIRVIGRVFSSAEALVQSFRKVKQHTKEELKSLQGKDEDKDEDEKEKAACSAAAMEEDSEASSSRISDSSQGDNNLQKLGPDDVSVDIEAIRRVYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEYLEMALPLFCKAMSKLPLAAQGKLVRLWSKYSADQIRRMMETFQQLITYKVISTDFNNRNLVNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKKGPRVDPLETELAVKTLDCRKPLIPFEEFINEPLNDVLEMDKDYTFFKVETENKFSFMTCPFILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFLDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTRDSVVIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML*