Sequence detailsbmy_11597 (Coding sequence)

Part of scaffold_642 (SequenceType object (1))

For more information consult the page for scaffold_642 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TM6SF1ENSTTRG00000004945 (Bottlenosed dolphin)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004661, Bottlenosed dolphin)

Protein Percentage 98.65%
cDNA percentage 98.65%
Ka/Ks Ratio 0.35268 (Ka = 0.0082, Ks = 0.0232)

BT.91422ENSBTAG00000012926 (Cow)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017175, Cow)

Protein Percentage 95.95%
cDNA percentage 94.14%
Ka/Ks Ratio 0.1194 (Ka = 0.0202, Ks = 0.1689)

TM6SF1 (Minke Whale)

Gene Details

transmembrane 6 superfamily member 1

External Links

Gene match (Identifier: BACU016045, Minke Whale)

Protein Percentage 99.73%
cDNA percentage 99.64%
Ka/Ks Ratio 0.21194 (Ka = 0.0013, Ks = 0.0062)

Additional orthologs identified in other species via the OPTIC pipeline.

TM6SF1 (Human)   Tm6sf1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1221 bp    Location:194638..222908   Strand:+
Raw sequence 
>bmy_11597
GGGCGGGGCGCCTTGAAGGGCGCGGCCGATGGGCGCGGGCGCAGCCGGAAGCTGGGGCGGGGCGCCCGCGCGGGATGCGGTGAAGGGCATAGCTGCGCGGCGGCGGCGATGAGTGCCTCGGCGGCCACAGGGGTCTTCGTGCTGTCCCTCTCGGCCATCCCGGTCACCTACGTCTTCAACCACCTGGCGGCCCAGCACGATTCCTGGACAATTGTAGGGGTGGCTGCCCTCATCCTGTTCCTGGTAGCCCTGTTGGCTCGTGTCCTGGTCAAAAGGAAACCACCCCGGGACCCACTGTTCTATGTGTAYGCAGTTTTTGGATTTACCAGCGTGGTGAACCTCATCATAGGACTGGAACAGGACGGGATCATTGATGGCTTCATGACATACTACTTGAGAGAGGGTGAACCGTATCTGAACACGGCCTATGGGCACATGATCTGCTACTGGGATGGCTCTGCTCATTATCTGATGTATCTGGTGATGGTGGCAGCCATAGCCTGGGAGGAAAGTTATAGAACCATTGGCCTATATTGGGTCGGATCTATTATTATGAGCATTGTTGTTTTTGTGCCAGGAAACATTGTAGGGAAGTATGGAACACGCATTTGCCCTGCTTTTTTCTTAAGCATACCATATACTTGTCTTCCTGTCTGGGCTGGTTTCAGAATCTATAATCAGCCATCAGAAAATTATAATTATCCCTCAAAGGTCATTCAAGAAATCCAAGCGAAAGACCTGCTGAGAAGACCATTTGATTTAATGTTGGTTGTGTGTCTCCTTCTGGCAACTGGATTTTGCCTGTTTAGAGGCTTGATTGCTTTGGATTGCCCAGCTGAGCTCTGCCGATTATATACGCAATTTCAAGAGCCCTACCTAAAGGATCCTGCTGCTTATGCTAAAATCCAGATGCTGGCATATCTGTTCTATTCTGTCCCTTACTTTGTGATGGCGCTTTATGGCTTAGTGGTTCCTGGATGCTCCTGGATGCCTGACATAACACTGATACATGCTGGAGGTCTAGCTCAGGCTCAGTTTTCTCACATCGGTGCTTCTCTTCATGCTAGAACTGCTTATATCTACAGAGTCCCTGAAGAAGCGAAAATCCTTTTTTTAGCATTAAACATAGCATATGGAGTTCTTCCTCAGCTCTTGGCCTATCGCTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGATGAAAAAGTTGAATAA

Related Sequences

bmy_11597T0 SequenceType object (3)

Length: 407 aa      View alignments
>bmy_11597T0
GRGALKGAADGRGRSRKLGRGARAGCGEGHSCAAAAMSASAATGVFVLSLSAIPVTYVFNHLAAQHDSWTIVGVAALILFLVALLARVLVKRKPPRDPLFYVYAVFGFTSVVNLIIGLEQDGIIDGFMTYYLREGEPYLNTAYGHMICYWDGSAHYLMYLVMVAAIAWEESYRTIGLYWVGSIIMSIVVFVPGNIVGKYGTRICPAFFLSIPYTCLPVWAGFRIYNQPSENYNYPSKVIQEIQAKDLLRRPFDLMLVVCLLLATGFCLFRGLIALDCPAELCRLYTQFQEPYLKDPAAYAKIQMLAYLFYSVPYFVMALYGLVVPGCSWMPDITLIHAGGLAQAQFSHIGASLHARTAYIYRVPEEAKILFLALNIAYGVLPQLLAYRCIYKPEFFIKTKADEKVE*