Part of scaffold_647 (Scaffold)

For more information consult the page for scaffold_647 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGC ENSBTAG00000024542 (Cow)

Gene Details

Phosphatidylinositol N-acetylglucosaminyltransferase subunit C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034036, Cow)

Protein Percentage 95.96%
cDNA percentage 95.29%
Ka/Ks Ratio 0.16078 (Ka = 0.0199, Ks = 0.1235)

PIGC  (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class C

External Links

Gene match (Identifier: BACU020506, Minke Whale)

Protein Percentage 99.33%
cDNA percentage 99.33%
Ka/Ks Ratio 0.31272 (Ka = 0.0034, Ks = 0.0109)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 894 bp    Location:380727..387102   Strand:+
>bmy_11609
ATGTGTGCCCAGCCTGTAACTAACACCAAAGAGGCCAGGTGGCAGAAGGTCTTGTATGAGCGACAGCCTTTTCCTGATAACTACGTGGATCAGAGCTTCCTGGAAGAGCTCCGGAAGAACGTCTATGCCCGGAAATACCAATATTGGGCTGTGGTATTTGAGTCCAGTGTGGTGATACAGCAGCTGTGCAGTGTCTGTGTTTTTGTGGTTATCTGGTGGTATATGGATGAGGGTCTTCTGGCTCCYCATTGGCTTTTTGGGACCGGCCTGGCTTCTTCACTGATTGGCTATGTTTTGTTTGATCTCATTGATGGAGGTGAAGGACGGAAGAAGAGTGGGCGGACCCGGTGGGCTGACTTGAAGAGTGCCCTAGTCTTCATAACTTTCACGTATGGCTTTTCACCGGTGCTGAAGACTCTGACAGAGTCCGTCAGCACTGACACCATCTATGCCATGTCAGTCTTCATGCTGTTAGGCCACCTCATCTTCTTTGACTATGGTGCCAATGCTGCCATTGTATCCAGCACACTGTCCTTGAACATGGCCATCTTTGCTTCTGTCTGCCTTGCCTCACGCCTGCCCCGGTCCCTACATGCCTTTGTCATGGTGACATTTGCCATCCAGATTTTTGCCCTATGGCCCATGTTACAGAAGAAACTGAAGGCATGTACTCCCCGCAGCTATGTGGGAGTCACACTGCTTTTTGCATTTTCAGCCTTGGGAGGCCTGCTGTCCATTAGTGCTGTGGCAGCCATACTCTTTGCCCTTCTGCTGGTTTCCATCTCATGTTTCTGCCCTTTCTACCTCATTCGCCTGCAGCTTTTTAAAGAAAACATTCATGGGCCTTGGGATGAGGCTGAAATCAAAGAAGACTTGTCGAGGTTCCTCAGCTGA

Related Sequences

bmy_11609T0 Protein

Length: 298 aa     
>bmy_11609T0
MCAQPVTNTKEARWQKVLYERQPFPDNYVDQSFLEELRKNVYARKYQYWAVVFESSVVIQQLCSVCVFVVIWWYMDEGLLAPHWLFGTGLASSLIGYVLFDLIDGGEGRKKSGRTRWADLKSALVFITFTYGFSPVLKTLTESVSTDTIYAMSVFMLLGHLIFFDYGANAAIVSSTLSLNMAIFASVCLASRLPRSLHAFVMVTFAIQIFALWPMLQKKLKACTPRSYVGVTLLFAFSALGGLLSISAVAAILFALLLVSISCFCPFYLIRLQLFKENIHGPWDEAEIKEDLSRFLS*