Part of scaffold_640 (Scaffold)

For more information consult the page for scaffold_640 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DLC1 ENSTTRG00000003950 (Bottlenosed dolphin)

Gene Details

deleted in liver cancer 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003730, Bottlenosed dolphin)

Protein Percentage 83.18%
cDNA percentage 82.97%
Ka/Ks Ratio 0.1127 (Ka = 0.0075, Ks = 0.0667)

BT.24236 ENSBTAG00000015541 (Cow)

Gene Details

rho GTPase-activating protein 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020664, Cow)

Protein Percentage 95.38%
cDNA percentage 92.93%
Ka/Ks Ratio 0.07203 (Ka = 0.0218, Ks = 0.3021)

DLC1  (Minke Whale)

Gene Details

deleted in liver cancer 1

External Links

Gene match (Identifier: BACU005199, Minke Whale)

Protein Percentage 99.58%
cDNA percentage 99.4%
Ka/Ks Ratio 0.0831 (Ka = 0.0019, Ks = 0.0225)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3087 bp    Location:204179..231098   Strand:+
>bmy_11632
ATGAAGCTGGAAATTAGTCCTCATCGGAAGAGAAGTGAGGATTCGGACGAGGATGAGCCTTGTGCAATCAGTGCCAAATGGACTTTCCAGAGGGACAGCAAGAGGTGGTCCCGGCTTGAAGAGTTCGATGTCTTTTCTCCAAAGCAGGACCCCGTCCCTGGGTCCCCAGACGATCCCCACCTGAAGAACGCCCCCAGCCGTGAAAGCGTGCTGACGGACCTCAGCGAGCGCCAGGAGGTGGCTTCTGTCCGCAGCCTCAGCAGCACCAGCAGCCTCGCCACGCAAGCGACCCAACTCGGGGGCGCGGCGACGGCCCGGACTAACTCCGTCACCAGCGTCTGCTCCTCCGGCACCTTCGTAGGCAACGATGACTCTTTCTGCAGCCTGCCCTCTCCCAAGGAACTGTCCAGCTTCAGCTTTAGCGTGAAAGGCCACGAGAAGAACACCAAGTCCAAGACGCACAGCCTGCTGAAACGCATGGAGAGCCTGAAGCTCAAGGGCTCCCACCACAGCAAGCACAAGGTGCCGTCCAAGCTGGGGCTGATCATCAGCGGGCCCATCCTGCAGGAGGGGGTGGACGAGGAGAAGCTCAAGCAGCTGAACTGCGTGGAGATCTCCGCCCTCAACGGCAACCGCATCAACGTCCCTGCCGTGCGGAAGCGGAGCGTCTCCAACTCCACGCAGACCAGCAGCAGCAGCAGCCAGTCCGAGACCAGCAGCAACGTCAGCACGCCCAGTCCCGTCACCAGGACCCGGAGCCTCAGTGCCTGCAACAAGCGGGGAGGCATGTACCTAGAGGGCTTCGATCCGTTCAACCAGTCCACGTTCAACAACGTTATGGAACAGAACTTTAAAAACTGCGAGAGCTACCCGGAGGACGCGGTGTTCTACATCCCAGAAGATCACAAGCCTGGCACTTTCCCCAAAGCCCTCTCCAACGGCAATTTCTCTCCCTCGGGGAATAACAGCTCCGTGAACTGGAGGACTGGAAGCTTCCACGGCCCTGGCCATATCAGCCTGAGGAGGGAAGACAGCAGCGACAGCCCCAAGGAACTCAAGAGACGCAATTCCTCGAGCTCCATGACCAGCCGCCTGAGTATCTATGACAACGTGCCCGGCTCCATCCTCTATTCCAGTTCCGGTGACCTGGCCGACCTGGAGAACGAGGACATCTTCCCCGAGCTGGACGACATCCTCTACCACGTGAAGGGGATGCAGAGGATAGTCAACCAGTGGTCGGAGAAATTTTCAGACGAGGGAGACTCAGACTCGGCCCTGGACTCGGTCTCCCCATGCCCGTCCTCTCCCAAGCAGATACACCTGGACGTGGACAATGACCGAGCCACCCCCAGCGACCTGGACAGCACGGGCAACTCACTGAACGAACCCGAGGAGCCCTCAGACATCCCGGAAAGGAGGGATTCTGGGGTCGGGGCCTCCCTGACTAGGTCCAGCAGGGCTGTGCCCAAGTTCATGAAAAGGATCAAGGTTCCAGACTACAAGGACCGGCATGTATTCGGGGTCCCTCTGACGGTCAACGTGCAGCGCACAGGACAGCCCCTCCCCCAGAGCATTCAGCAGGCCATGCGCTACCTCCGCAACCATTGTCTGGATCAGGTTGGACTCTTCAGAAAATCGGGTGTCAAATCCCGGATTCAGGCTCTGCGCCAGATGAATGAAAGCGCCATAGATTGTGTCAACTATGAGGGGCAGTCTGCTTATGATGTGGCAGACATGTTGAAGCAGTATTTTCGAGATCTTCCTGAGCCACTAATGACGAACAAACTCTCGGAAACCTTTCTGCAGATCTACCAATATGTGCCCAAGGACCAGCGCCTCCAGGCGATCAAGGCCGCCATCATGCTCCTGCCTGACGAGAACCGGGAGGTCCTGCAGACGCTCCTCTACTTCCTGAGCGATGTCACAGCAGCTGTGAAGGAGAACCAGATGACTCCCACCAACTTGGCCGTGTGCTTGGCGCCTTCCCTCTTCCACCTGAACACCCTCAAGAGAGAGAATTCCTCTCCAAGGGTAATGCAAAGAAAACAAAGCTTGGGCAAACCAGATCAGAAAGATTTGAATGAAAATCTTGCTGCCACTCAAGGGCTAGCCCATATGATTGCTGAGTGCAAGAAGCTTTTCCAGGTTCCTGAGGAAATGAGCCGATGTCGAAATTCCTACACCGAACAAGAGCTGAAGCCGCTTACGCTAGAAGCGTTAGGACGCCTTTGTAATGATGAGTCAGCCAACTACCAACACTTCCTCCAGGACTGTGTGGACAGCCTGTTTAAAGAGGTCAAAGAGAAATTCAAAGGCTGGGTCAGCTACTCTACATCTGAGCAGGCTGAGCTATCCTATAAGAAGGTGAGTGAAGGACCACCTCTAAGGCTTTGGAGGGCAACCATTGAAGTCCCTGCATCGCCTGAGGAAATCTTAAAGCGCCTACTTAGAGAGCAGCACCTCTGGGATGTAGACTTGTTGGATTCAAAAGTGATTGAGATCCTGGACAGCCAAACTGAAATTTACCAGTATGTCCAAAACAGTATGGCCCCCCATCCTGCTCGGGACTACGTTGTTCTGAGAACATGGAGGACTAATTTACCCAAGGGAGCTTGTGCCCTTGTACTCACCTCCGTGGATCACGACCGGGCCCCTGTGGTGGGAGTGAGGGTCAATGTGCTCCTGGCCAGGTATCTAATCGAACCCTGCGGGTCAGGGAAATCCAAACTCACCTACATGTGCAGAGCTGACTTAAGGGGCCACATGCCAGAGTGGTACACGAAATCTTTTGGACATTTGTGTGCAGCTGAAGTTGTAAAGATCCGAGACTCCTTCAGTAATCAGAACACTGAAACCAAAGACACCAAATCTAGGTCTGTATTATGGACCTTGACTGGAATATATGACTGTGCAAAAAAAAAAAAAAAAAGTATTCCTATTCGAATTGCTTCTGAGAAGCAAAGCTATAAATACATTAGGGAAGATAATGAAGAGACGTCACTCTCTTGCGATGTCGGTGTCTGTGTACGTGTACCTATGTCATTTTCTTTGCAGTGTGTGGAGGGACTGGTGTATCCACTGGAATAG

Related Sequences

bmy_11632T0 Protein

Length: 1029 aa      View alignments
>bmy_11632T0
MKLEISPHRKRSEDSDEDEPCAISAKWTFQRDSKRWSRLEEFDVFSPKQDPVPGSPDDPHLKNAPSRESVLTDLSERQEVASVRSLSSTSSLATQATQLGGAATARTNSVTSVCSSGTFVGNDDSFCSLPSPKELSSFSFSVKGHEKNTKSKTHSLLKRMESLKLKGSHHSKHKVPSKLGLIISGPILQEGVDEEKLKQLNCVEISALNGNRINVPAVRKRSVSNSTQTSSSSSQSETSSNVSTPSPVTRTRSLSACNKRGGMYLEGFDPFNQSTFNNVMEQNFKNCESYPEDAVFYIPEDHKPGTFPKALSNGNFSPSGNNSSVNWRTGSFHGPGHISLRREDSSDSPKELKRRNSSSSMTSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSDEGDSDSALDSVSPCPSSPKQIHLDVDNDRATPSDLDSTGNSLNEPEEPSDIPERRDSGVGASLTRSSRAVPKFMKRIKVPDYKDRHVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNESAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEEMSRCRNSYTEQELKPLTLEALGRLCNDESANYQHFLQDCVDSLFKEVKEKFKGWVSYSTSEQAELSYKKVSEGPPLRLWRATIEVPASPEEILKRLLREQHLWDVDLLDSKVIEILDSQTEIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALVLTSVDHDRAPVVGVRVNVLLARYLIEPCGSGKSKLTYMCRADLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTKSRSVLWTLTGIYDCAKKKKKSIPIRIASEKQSYKYIREDNEETSLSCDVGVCVRVPMSFSLQCVEGLVYPLE*