Sequence detailsbmy_11637 (Coding sequence)

Part of scaffold_640 (SequenceType object (1))

For more information consult the page for scaffold_640 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LONRF1ENSTTRG00000014566 (Bottlenosed dolphin)

Gene Details

LON peptidase N-terminal domain and ring finger 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013813, Bottlenosed dolphin)

Protein Percentage 69.14%
cDNA percentage 70.78%
Ka/Ks Ratio 0.35358 (Ka = 0.0399, Ks = 0.1129)

LONRF1ENSBTAG00000020084 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012816, Cow)

Protein Percentage 79.3%
cDNA percentage 82.4%
Ka/Ks Ratio 0.35011 (Ka = 0.1478, Ks = 0.422)

LONRF1 (Minke Whale)

Gene Details

LON peptidase N-terminal domain and ring finger 1

External Links

Gene match (Identifier: BACU005202, Minke Whale)

Protein Percentage 94.1%
cDNA percentage 96.07%
Ka/Ks Ratio 0.46961 (Ka = 0.0324, Ks = 0.0689)

Additional orthologs identified in other species via the OPTIC pipeline.

LONRF1 (Human)   Lonrf1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1755 bp    Location:504442..536145   Strand:+
Raw sequence 
>bmy_11637
ATGTTTTCCCTCTTAAAAAAGCTGACTCTTATCAACCCATTTCCTCCAGAAGCAGGATCACTGTGTACTCTCCTAAGACCGTGCCTTGAGCCCAGCGACTTGACTCTGAAAATTTACAGAGCTGAATCATATGCTGGTCTGCGAGAGTTTAAAGCAGCCATAGAAGATTTAAATGCAATTCTCTTTCAACTGCCAAATTGGCCTGAGGGATACAACTGGCCCTATTGCAGAGCTGGATCCAAACTGGTTATCAATGGAGGAGGTTTTAGCAACGGAAAGAGAAGAGAAAACAATTCCATCCGTAAAAGTCGTGTATATGTGCTTTTATTGAAGGTCTACTTCAGGAAAGGAAAAGTCCTCCATGATGCTGGTTTTTTAGGTGATGCCTTACAACTGTTTCTTCAGTGCTTAGCGCTTGATGAAGATTTCGCACCTGCAAAGCTAGAAGTAGAAAAGATTTTATGTGATTTATTATCACCTGAAAACTTAAAAGAAGGCCTGAAGGACTCTTCCTGGAGTTCATTACCATGTATTAAAAACAAACCTTTTGGTTTTCCTTCAGTAATAGAAGAGTCTCATTGTGCCAGTGAGCTTAGCCCAGAGCAGAATGAAGAAATAGCAGAGGTCACTTCAGAGACTGTCAAAGGAAGCCTAAACCATGCTCGGTCAGCACAGGCTATAAATTCAACAGACATGCCTGCCAGAGAGGATTGTTTAAAAAGAGTGTCCTCAGAACCTTCACTCTCTGTTCAAGAGAAAGGTGTTCTGCTGAAAAGAAAGCTGTCTCTCTTAGACCAGGATGTGATTGTAAATGAAGATGGAAGAAATAAGCTGAAAAGACAGGGAGAAACTCCCAATGAAGTCTGTACGTTTTCATTAACTTACGGTGACATCCCAGAAGAATTAATAGATGTCGCAGATTTTGAGTGTTCTCTCTGCATGAGGTTGTTTTTCGAGCCAGTAACAACCCCTTGTGGACATTCATTCTGTAAGAATTGTCTTGAGCGTTGTTTAGATCACACACCATACTGTCCCCTTTGTAAAGAAAGCTTAAAAGAGTATCTAGCAGATAGGAGGTACTGTGTCACACAGCTGTTGGAAGATTTAATAGTGAAGTATCTGCCTGATGAACTGTCTGAGAGAAAAAAAATATATGATGAAGAAACTGCTGAACTCTCACACTTGACTAAGAATGTTCCARTATTTGTTTGCACTATGGCCTACCCCACTGTGCCTTGCCCTCTTCATGTATTTGAGCCAAGATACAGACTGATGATTCGAAGAAGTATACAGACTGGAACTAAACAGTTTGGGATGTGTGTAAGCGATACACAAAATGGTTTTGCAGATTATGGTTGTATGTTACAAATTAGAAATGTACATTTCTTGCCTGATGGGAGGTCTGTGGTTGACACAGTTGGAGGAAAGCGGTTTAGGGTTTTAAAAAGAGGGATGAAAGATGGATACTGCACTGCAGACATTGAATATCTGGAAGATGTTAAGGGATGGATGGGAAGATTAGACACAGACACCTTACTGACTGTTGTTGAGAATGAAGATGAGATAGAGAACCTCCGACAGCTTCACGATTTGGTCTACTCTCAAGCCTGCAGCTGGTTTCAGAATTTAAGAGACAGATTTCGAAGCCAAATTCTTCAGCACTTTGGATCAATGCCCGGGAGGGAGGAAAACCTCCAGGTTAATGTCAAAAAAAGATCAGTGGAGGAATCAAGCTACAGAGTAGAGAACAGATGA

Related Sequences

bmy_11637T0 SequenceType object (3)

Length: 585 aa      View alignments
>bmy_11637T0
MFSLLKKLTLINPFPPEAGSLCTLLRPCLEPSDLTLKIYRAESYAGLREFKAAIEDLNAILFQLPNWPEGYNWPYCRAGSKLVINGGGFSNGKRRENNSIRKSRVYVLLLKVYFRKGKVLHDAGFLGDALQLFLQCLALDEDFAPAKLEVEKILCDLLSPENLKEGLKDSSWSSLPCIKNKPFGFPSVIEESHCASELSPEQNEEIAEVTSETVKGSLNHARSAQAINSTDMPAREDCLKRVSSEPSLSVQEKGVLLKRKLSLLDQDVIVNEDGRNKLKRQGETPNEVCTFSLTYGDIPEELIDVADFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLLEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPXFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQNGFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKGWMGRLDTDTLLTVVENEDEIENLRQLHDLVYSQACSWFQNLRDRFRSQILQHFGSMPGREENLQVNVKKRSVEESSYRVENR*