Sequence detailsbmy_11648 (Coding sequence)

Part of scaffold_668 (SequenceType object (1))

For more information consult the page for scaffold_668 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM43ENSBTAG00000009197 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012117, Cow)

Protein Percentage 66.59%
cDNA percentage 76.65%
Ka/Ks Ratio 0.5167 (Ka = 0.2404, Ks = 0.4652)

TRIM43 (Minke Whale)

Gene Details

tripartite motif containing 43

External Links

Gene match (Identifier: BACU020183, Minke Whale)

Protein Percentage 28.87%
cDNA percentage 51.43%
Ka/Ks Ratio 0.52516 (Ka = 0.7316, Ks = 1.3932)

Genome Location

Sequence SequenceType object (2)

Length: 1314 bp    Location:175393..181562   Strand:+
Raw sequence 
>bmy_11648
ATGGATTCAGACATCCCAGAAGCCTTCCAAAAAGAGCTCACCTGCCTCGTGTGCCTGAATTACCTTCTAGACCCAGTCACCATAGGCTGTGGACACAGCTTCTGCAGGTCCTGTCTCTGTCTTTTCTGGGAGCAAGCCGAAGACCCTGCCAGTTGCCCAGTGTGCAGGCAACGATCAGAGCAGACAAACCTCAAAACCAATTTTCTTCTGAAGAATCTGGTGTCCATTGCCAGAAAAGCAAATCTCGGGCAATTCCTGAACTCTGAGGAACATATGTGTGGGACCCATAAGGAGACAAAGAAGATCTTCTGTGAAGCAACAAGAGCTTGCTCTGTTTGGTCTGCTCTCAAAGAGCACAGGGCTCACAGGCACCGTTCCACTGAAGAGGCTGCTGAGGAATACTGGGAGAAGCTGGCAAACCAAATGAGATCTCTATGGGAAAAGATCCAAGAAATTGAAAGAAATCTCAAGAGAAATGGCAGAGGAACTGACCCTTGGATGTTTTATGTGTATCGATATGGAGACATGATTAGGAAAACTTATCAGATGGTAACTCCATTTCTTCAGGAGGAAGAAAATTACTACTTAGGGAGTATTATAAAAGAAAGCCAAAAGATTTGCAAGCAAATCAGAAAAAGACAAGAGGAAATGAGTGGAAAGAAGACACACCTCAAAGTAATATACAAAGAGCTCATGAAAATGTCCTATAAACCAGATGTGGAGCTGCTCCAGGAGCGAGTCAGCACAGCTGCACATGCCTCAGCCTCTGCTGCCAGAACTCCGTGCACGACCCATCACTGGGCTGATGGACTGGCTCAACCGCTTCCGAGTAATGAAGTAAGCAGCCAGCACATCAGGCTGTTTGATGACGCGAGAAGTTTGAGGTATGAGCATGACAGCCTCTATGTGTCTTTGGATGGCAGAACATCGAAGTATTTTGCTGCATGGGGATCCCGGGGCTTCACCTCTGGCAAACAATACTGGGAGGTGGATGTGGACAGCTCTTGGGACTGGGCTGTAGGCGTCTGTAAGGATTCCTGGACAAGGAAGGATGACGGCATACTGAAGGAATCCAACAGGGACAGCTTTCTCCTTGTGTGTGTGAAGGAGGATCGTCATTACCGTCTCTGGACCACCATCCCGACCACTCCTCTGTACATAGAGAAACCTCTGGGCAGGATTGGCGTGTTCCTTGATTTTGACAGCGGGAGTATGAGTTTTGTGGATGTTGTCAAGCGCTCCCTCCTTTGGAGGTACGAGGATGGCCTGTTCACTTTCCCTGTCAGGCCTTTCATTTGCACTGGCCACACGTGA

Related Sequences

bmy_11648T0 SequenceType object (3)

Length: 438 aa      View alignments
>bmy_11648T0
MDSDIPEAFQKELTCLVCLNYLLDPVTIGCGHSFCRSCLCLFWEQAEDPASCPVCRQRSEQTNLKTNFLLKNLVSIARKANLGQFLNSEEHMCGTHKETKKIFCEATRACSVWSALKEHRAHRHRSTEEAAEEYWEKLANQMRSLWEKIQEIERNLKRNGRGTDPWMFYVYRYGDMIRKTYQMVTPFLQEEENYYLGSIIKESQKICKQIRKRQEEMSGKKTHLKVIYKELMKMSYKPDVELLQERVSTAAHASASAARTPCTTHHWADGLAQPLPSNEVSSQHIRLFDDARSLRYEHDSLYVSLDGRTSKYFAAWGSRGFTSGKQYWEVDVDSSWDWAVGVCKDSWTRKDDGILKESNRDSFLLVCVKEDRHYRLWTTIPTTPLYIEKPLGRIGVFLDFDSGSMSFVDVVKRSLLWRYEDGLFTFPVRPFICTGHT*