Sequence detailsbmy_11651 (Coding sequence)

Part of scaffold_668 (SequenceType object (1))

For more information consult the page for scaffold_668 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHORDC1ENSTTRG00000004449 (Bottlenosed dolphin)

Gene Details

cysteine and histidine-rich domain (CHORD) containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004191, Bottlenosed dolphin)

Protein Percentage 98.19%
cDNA percentage 98.59%
Ka/Ks Ratio 0.24697 (Ka = 0.0082, Ks = 0.033)

CHORDC1ENSBTAG00000013615 (Cow)

Gene Details

Cysteine and histidine-rich domain-containing protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018100, Cow)

Protein Percentage 96.39%
cDNA percentage 95.18%
Ka/Ks Ratio 0.11466 (Ka = 0.0173, Ks = 0.1509)

CHORDC1 (Minke Whale)

Gene Details

cysteine and histidine-rich domain (CHORD) containing 1

External Links

Gene match (Identifier: BACU018904, Minke Whale)

Protein Percentage 97.16%
cDNA percentage 97.52%
Ka/Ks Ratio 0.29126 (Ka = 0.0171, Ks = 0.0587)

Additional orthologs identified in other species via the OPTIC pipeline.

CHORDC1 (Human)   Chordc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1170 bp    Location:356499..334399   Strand:-
Raw sequence 
>bmy_11651
TGCGCCTGCGCGACCGGAAAATTCGCGAAGGTTCCTGAAGCGGAAGTGGCCGTTTCCGGAAGCCGGCAGCCGCCCCAGCCCGCAGACGGGTGGTTGCGACAGGGGAGTTGTAAAGGCATTGTCTGGCGGTTCCAGGCGTTTGGCCCTGACCCGGAGCGGTGGGAAGAGAAAATGGCCCTGCTGTGCTACAACCGAGGCTGCGGCCAGCGCTTCGATCCCGAGACCAATTCCGATGATGCTTGCACATACCACCCAGGCATTCCAGTCTTTCATGATGCATTAAAGGGTTGGTCTTGCTGTAAGAGAAGAACAACTGATTTTTCTGATTTTTTAAGCATTGCAGGCTGTACGAAAGGAAGGCATGATAGTGAGAAGCCACCCGAGCCAGTCAAACCTGAAGTCAAGACTACTGAGAAGAAAGAACTCTCTGGATTGAAACCCAAATTTCAGGAGCATATCATTCAAGCCCCTAAACCAATAGAAGCAATAAAAAGGCCAAGCCCGGATGAACCAATGACAAATTTGGAATTAAAAATATCTGCCTCCCTAAAACAAGCACTTGATAAACTTAAACTATCATCGGGGAATGAAGAAAATAAGAAAGAAGACGACAGTGATGAAATTAAGATTGGAACCTCATGTAAAAATGGAGGGTGTTCGAAGACATACCAGGGTCCACAGAGTCTAGAAGAAGTCTGTGTATATCATTCTGGAGTACCTATTTTCCATGAAGGGATGAAATACTGGAGCTGTTGCAGAAGAAGAACTTCTGATTTTAATACATTCTTAGCCCAAGAGGGCTGTACAACAGGGAAACACACATGGACTAAAAAGGATGCTGGGAAAAAGGTTGTTCCGTGTAGACATGACTGGCATCAGACTGGGGGTGAAGTCACCATTTCAGTATATGCTAAAAATTCACTTCCGGAACTTAGTCAAGTAGTAGCAAATAGTACATTGTTAAATGTGCACATTGTATTTGAAGGAGAGAAGGAATTTCATCAAAATGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAAGTATGACTGCAACAAAGATTGAAATTACCATGAGAAAAGCTGAACCTATGCAATGGGCAAGCCTTGAACTGCCTGCAGCCAAAAACCAGGAAAAACAAAAAGAAGATACAACAGAATGA

Related Sequences

bmy_11651T0 SequenceType object (3)

Length: 390 aa      View alignments
>bmy_11651T0
CACATGKFAKVPEAEVAVSGSRQPPQPADGWLRQGSCKGIVWRFQAFGPDPERWEEKMALLCYNRGCGQRFDPETNSDDACTYHPGIPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGRHDSEKPPEPVKPEVKTTEKKELSGLKPKFQEHIIQAPKPIEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEDDSDEIKIGTSCKNGGCSKTYQGPQSLEEVCVYHSGVPIFHEGMKYWSCCRRRTSDFNTFLAQEGCTTGKHTWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVVANSTLLNVHIVFEGEKEFHQNVKLWGVIDVKRSYVSMTATKIEITMRKAEPMQWASLELPAAKNQEKQKEDTTE*