Part of scaffold_648 (Scaffold)

For more information consult the page for scaffold_648 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL18 ENSTTRG00000010522 (Bottlenosed dolphin)

Gene Details

interleukin 18 (interferon-gamma-inducing factor)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009981, Bottlenosed dolphin)

Protein Percentage 94.24%
cDNA percentage 97.56%
Ka/Ks Ratio 1.71167 (Ka = 0.0294, Ks = 0.0172)

IL18 ENSBTAG00000000277 (Cow)

Gene Details

Interleukin-18

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055793, Cow)

Protein Percentage 88.54%
cDNA percentage 93.92%
Ka/Ks Ratio 0.60727 (Ka = 0.056, Ks = 0.0922)

IL18  (Minke Whale)

Gene Details

interleukin 18 (interferon-gamma-inducing factor)

External Links

Gene match (Identifier: BACU004562, Minke Whale)

Protein Percentage 97.6%
cDNA percentage 98.4%
Ka/Ks Ratio 1.01977 (Ka = 0.0164, Ks = 0.0161)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 579 bp    Location:15575..24332   Strand:+
>bmy_11653
ATGGCTGCTGAACCAGAAGACAATTGCATCAGCTTTGTGGAAATGAAATTTATTAACAGTACACTTTACTTTGTAGCTGAAAATGATGAAGACCTGGAATCAGATTACTTTGGCAAGCTTGAACCTAAGTTCTCAGTCATACGAAATTTGAACGACCAAGTTCTCTTCATTAACCAGGGAAGTCAACCCATCTTTGAGGATATGCCTGATTCTGACTGTTCAGATAATGCACCCCAGACCATATTTATCATATGTATGTATAAAGACAGCCTCACTAGAGGTCTGGCAGTAACCATCTCTGTGCACTGTAAGAAAATTTCTACTCTCTCCTGTAAGAACAAAATTATTTCCTTTAAGGAAATGAGTCCTCCTGATAATATTGATGATGAAGGAAATGACATCATATTCTTTCAGAGAAGTGTTCCAGGACATGATGATAAGATACAATTTGAGTCTTCATTGTACGAAGGATACTTTCTAGCCTGTAAAAAAGAGAACGACCTTTTCAAACTCATTTTGAAAAAAAAGGATGAAAATGGAGATAAATCTGTAATGTTCACTGTTCAAAACAAGAACTAG

Related Sequences

bmy_11653T0 Protein

Length: 193 aa      View alignments
>bmy_11653T0
MAAEPEDNCISFVEMKFINSTLYFVAENDEDLESDYFGKLEPKFSVIRNLNDQVLFINQGSQPIFEDMPDSDCSDNAPQTIFIICMYKDSLTRGLAVTISVHCKKISTLSCKNKIISFKEMSPPDNIDDEGNDIIFFQRSVPGHDDKIQFESSLYEGYFLACKKENDLFKLILKKKDENGDKSVMFTVQNKN*