Sequence details bmy_11654 (Coding sequence)

Part of scaffold_648 (Scaffold)

For more information consult the page for scaffold_648 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000010520 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009979, Bottlenosed dolphin)

Protein Percentage 98.33%
cDNA percentage 98.61%
Ka/Ks Ratio 0.26583 (Ka = 0.008, Ks = 0.0299)

SDHD ENSBTAG00000016266 (Cow)

Gene Details

Succinate dehydrogenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021636, Cow)

Protein Percentage 90.0%
cDNA percentage 93.06%
Ka/Ks Ratio 0.41067 (Ka = 0.0533, Ks = 0.1297)

SDHD  (Minke Whale)

Gene Details

succinate dehydrogenase complex, subunit D, integral membrane protein

External Links

Gene match (Identifier: BACU004563, Minke Whale)

Protein Percentage 77.92%
cDNA percentage 82.25%
Ka/Ks Ratio 0.5771 (Ka = 0.1799, Ks = 0.3118)

Additional orthologs identified in other species via the OPTIC pipeline.

SDHD (Human)   Sdhd (Mouse)  

Genome Location

Sequence Coding sequence

Length: 384 bp    Location:87772..77811   Strand:-
Raw sequence 
>bmy_11654
ATGGCGACTCTCTGGAGGCTGAGTGTCTTCTGCGGTGCCGGAGGTGGGCGAGCTGGTTCCAAGGCTGCATCTCTCCACTGGACTGGTGAGAGGGTTGTCAGTGTTTTGCTCCTGGGCCTAATTCCAGCTGCTTATTTGAATCCTTGCTCTGCGGTGGACTACTCTCTGGCTGCAGCCCTCACTCTTCATAGTCACTGGCAAGTACAGCAGTCCTTTCAGGGCATTGGACAAGTTGTTACTGACTATGTTCGAGGAGCTGCGTTGCAGAAAGCTGCCAAGGCAGGCTTTTTGGTGCTCTCGGCGTTCACCTTTGCTGGCCTTTGTTATTTCAACTATCATGATGTGGGCATCTGCAAAGCTGTGGCTATGCTGTGGAAGCTCTGA

Related Sequences

bmy_11654T0 Protein

Length: 128 aa      View alignments
>bmy_11654T0
MATLWRLSVFCGAGGGRAGSKAASLHWTGERVVSVLLLGLIPAAYLNPCSAVDYSLAAALTLHSHWQVQQSFQGIGQVVTDYVRGAALQKAAKAGFLVLSAFTFAGLCYFNYHDVGICKAVAMLWKL*