Sequence detailsbmy_11687 (Coding sequence)

Part of scaffold_665 (SequenceType object (1))

For more information consult the page for scaffold_665 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PEX5LENSTTRG00000008912 (Bottlenosed dolphin)

Gene Details

peroxisomal biogenesis factor 5-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008452, Bottlenosed dolphin)

Protein Percentage 93.77%
cDNA percentage 93.68%
Ka/Ks Ratio 0.36526 (Ka = 0.0485, Ks = 0.1327)

PEX5LENSBTAG00000013219 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017592, Cow)

Protein Percentage 94.55%
cDNA percentage 90.91%
Ka/Ks Ratio 0.15191 (Ka = 0.0436, Ks = 0.2869)

PEX5L (Minke Whale)

Gene Details

peroxisomal biogenesis factor 5-like

External Links

Gene match (Identifier: BACU016603, Minke Whale)

Protein Percentage 10.65%
cDNA percentage 32.38%
Ka/Ks Ratio 0.17283 (Ka = 1.6369, Ks = 9.4708)

Additional orthologs identified in other species via the OPTIC pipeline.

PEX5L (Human)   Pex5l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1158 bp    Location:498610..521418   Strand:+
Raw sequence 
>bmy_11687
ATGTCAAACATACTTTTAGAGAAATGTTTTAAAACAAGCTCAACCTGCATCTTTAAAAAGCTATTCAAGAAAGCGTCCCCTCAGTATCTAAATGTGCAGTCAGATACAGAGTTTTGGGATAAGATGCAAGCAGAATGGGAAGAAATGGCCCGGAGGAACTGGATATCGGAGAACCAAGAAGCCCAGAACCAGGTTACAATCTCAGCTAGCGAGAAGGGATATTACTTTCACACTGAAAACCCCTTCAAGGACTGGCCTGGAGCATTTGAAGAAGGCTTAAAAAGGCTGAAGGAAGGGGACCTGCCAGTTACCATCCTGTTCATGGAGGCAGCAATTCTTCAGGATCCTGGAGATGCAGAGGCATGGCAGTTCCTCGGGATAACCCAAGCAGAGAATGAAAATGAACAAGCAGCTATTGTCGCCCTCCAGAGGTGCTTAGAATTGCAGCCCAACAACTTGAAAGCTTTGATGGCTTTGGCTGTGAGTTACACTAACACCGGACATCAGCAGGATGCCTGTGAAGCTTTAAAGAATTGGATTAAGCAAAATCCAAAGTACAAATACCTTGTGAAGAGCAAGAAGGGGTCTCCAGGCCTCACCCGGCGGATGTCTAAGTCTCCCGTTGATAGCTCTGTTCTGGAAGGAGTGAAGGAATTATATCTAGAAGCTGCCCACCAAAATGGAGATATGATCGACCCAGACCTACAGACAGGTCTGGGGGTATTGTTCCACCTGAGTGGAGAATTTAATAGAGCAATAGATGCATTTAATGCTGCCTTAACTGTTCGGCCAGAGGACTATTCATTATGGAACCGCCTCGGGGCAACCTTGGCAAACGGAGACCGCAGCGAGGAAGCCGTGGAGGCCTACACACGAGCACTGGAGATTCAGCCAGGCTTCATCCGGTCCAGATACAACCTGGGGATAAGCTGCATCAACCTGGGCGCCTACAGAGAAGCGGTCAGCAATTTTCTCACTGCCCTCAGTTTGCAAAGAAAGAGCAGGAATCAACAGCAAGTTCCTCATCCTGCAATCTCTGGGAATATCTGGGCTGCCCTCAGAATTGCCCTTTCTCTGATGGACCAACCGGAACTCTTCCAGGCAGCTAATCTCGGTGACCTGGATGTGCTCCTAAGAGCTTTCAACTTGGATCCTTGA

Related Sequences

bmy_11687T0 SequenceType object (3)

Length: 386 aa      View alignments
>bmy_11687T0
MSNILLEKCFKTSSTCIFKKLFKKASPQYLNVQSDTEFWDKMQAEWEEMARRNWISENQEAQNQVTISASEKGYYFHTENPFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTGHQQDACEALKNWIKQNPKYKYLVKSKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLDP*