Part of scaffold_657 (Scaffold)

For more information consult the page for scaffold_657 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAMD4A ENSTTRG00000008280 (Bottlenosed dolphin)

Gene Details

sterile alpha motif domain containing 4A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007841, Bottlenosed dolphin)

Protein Percentage 80.38%
cDNA percentage 81.26%
Ka/Ks Ratio 0.38084 (Ka = 0.1684, Ks = 0.4423)

SAMD4A ENSBTAG00000001468 (Cow)

Gene Details

protein Smaug homolog 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001925, Cow)

Protein Percentage 76.6%
cDNA percentage 78.99%
Ka/Ks Ratio 0.30156 (Ka = 0.1759, Ks = 0.5835)

SAMD4A  (Minke Whale)

Gene Details

sterile alpha motif domain containing 4A

External Links

Gene match (Identifier: BACU015356, Minke Whale)

Protein Percentage 63.42%
cDNA percentage 71.16%
Ka/Ks Ratio 0.49883 (Ka = 0.3154, Ks = 0.6322)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2100 bp    Location:53991..10578   Strand:-
>bmy_11703
ATGTGGAACCCAGCTGCTGTTGACGCAAAGCAGGCTAAGAGTAGAACACCACTTACGGGTGTCATAGCCGATGGAAACTGTGAGAAATTTAGTCCTTCTGTTTGTATCAAACCCTTCAAAGAGGGTATTTTACCCAAACTCGACCATCTCTGTGCCTTCCAAGACCTACACATGCTCCCCACAAGTGTGGAAGCCGGAGGCCACCATGGACACGTCCCAGGATGGCGGAGCCCGCTCCAGCTCCACAGGGACCCGAGACCAAGGCACCTTCTTTCTTTTGCTCAGAGGCTGGTACAGAATGGGGCTGTTCATTCCACTCTGGCCAAAAATAGACAGGCTTCAGTTATCTTAATGGTGCTGCTAGACTTCTTCATTTTCGAAAGACATGTTTTCCTTCTTGCTTCAACCCTGAAGAATGTTCCAGCCTGGTTAAAGAGCCTCCGCCTTCACAAGTATGCCGCGCTCTTCTCCCAGATGACCTACGAGGAGATGATGGCCCTCACTGAGTGCCAGCTGGAGGCTCAGAATGTTACCAAAGGTGCAAGACACAAAATTGTCATCAGTATTCAGAAGCTCAAAGAGAGACAAAACCTCCTGAAGTCTTTGGAAAGGGACATCATCGAGGGGGGCAACCTGCGCATCCCCCTCCAGGAGCTGCACCAAATGATCCTGACTCCCATCAAGGCCTACAGCTCCCCGAGCGCCACCCCCGAGGCTCGCCGCCGGGAGTCCCAGGCTTCACACCCGCCTTCGCTGATGGGCCCGGAGAGCCAGAGCCCCGACTGCAAAGACAGCGCCGCGGCCGCCGGAGCCACGGCCACTGCCTCGGCTGGGGCCAGTGGCGGGCTCCAACCGCACCAGCTGAGCAGCTGTGACGGGGAGCTGGCTGTCACCCCCCTGCCAGAGGGGGATCTCCCTGGGCAGTTCACACGTGTCATGGGGAAAGTGTGCACACAGCTCTTGGTCTCCAGACCCGACGAGGAGAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATCCATGAGGCATTTACAGAGACACAGAAAAAACGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTCCCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAACCGCGGCTTCGGGCAGTCCAACTCCCTCCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCACGCCAGTACCAGATCCCCTCCCGGAATGTCCCTTCCGCCCGCCTTGGCCTCCTGGGCACCAGCGGATTCGTCAGCTCCACCCAGCGCAACACCGCAGCCAACCCCACCATCATGAAACAAGGAAGACAGAACCTCTGGTTCGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCGCACCCACAGCTCAGTCCAAAGGACCCGCTCGCTGCCTGTGCACACTTCACCACAGAATATGCTGATGTTCCAGCAGCCAGAATTCCAGCTTCCCGTGACTGAACCTGACATCAACAACAGGCTGGAGTCCTTGTGCCTCAGTATGACCGAGCACGCCCTGGGAGGTGAGTGCATCCTCCCCGCATGGCACTGCACACCTGGGAGAACCCCCAGCCACACGGGGTTGACCGGACCTCCACAATCTAGAGCTGAAGATGAGAGTGACCGCGCTGGCCGTGAAATCGACTGCTGCGGGTCCAGTAGCGTAGGTCGTCCTTGTAAACATATCAGTAGACCTGGGATTGGTTATTTTGTCATTTGTTTCTGTCGTGGGATGGCTTGGTGTGGGGCATGGGGAGGGATCTCTAAGGGAAACATAGGACTGGGAGCGGGTGGAGGGAATGCAAGTGGCTTCTTGGATGGAAATGAGGGGGAAAAAAAAGAGGATACCGCTTGGAAAGAGATGAGAGACTTGGGAGGGAGGCAGAAGCCCCAGCCCTTGGGAGCCTTCTCAGAAGCCTGCCTTCAGAGTCAGGCCCCAGGAGGAAGGCACGGATGCCTGCGACCAAAGCACAACGGCGGCTCGCTCTTTTATCAGCAGGGTCGTCTTTTTAAATGGCTGCCAAGCTCTGCTTCTCTGGAAGACGGAGCGGTCACGTAG

Related Sequences

bmy_11703T0 Protein

Length: 700 aa      View alignments
>bmy_11703T0
MWNPAAVDAKQAKSRTPLTGVIADGNCEKFSPSVCIKPFKEGILPKLDHLCAFQDLHMLPTSVEAGGHHGHVPGWRSPLQLHRDPRPRHLLSFAQRLVQNGAVHSTLAKNRQASVILMVLLDFFIFERHVFLLASTLKNVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGNLRIPLQELHQMILTPIKAYSSPSATPEARRRESQASHPPSLMGPESQSPDCKDSAAAAGATATASAGASGGLQPHQLSSCDGELAVTPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSTQRNTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGGECILPAWHCTPGRTPSHTGLTGPPQSRAEDESDRAGREIDCCGSSSVGRPCKHISRPGIGYFVICFCRGMAWCGAWGGISKGNIGLGAGGGNASGFLDGNEGEKKEDTAWKEMRDLGGRQKPQPLGAFSEACLQSQAPGGRHGCLRPKHNGGSLFYQQGRLFKWLPSSASLEDGAVT*