Part of scaffold_662 (Scaffold)

For more information consult the page for scaffold_662 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.44249 ENSBTAG00000010111 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013336, Cow)

Protein Percentage 96.83%
cDNA percentage 94.37%
Ka/Ks Ratio 0.06907 (Ka = 0.0149, Ks = 0.216)

TCF7L1  (Minke Whale)

Gene Details

transcription factor 7-like 1 (T-cell specific, HMG-box)

External Links

Gene match (Identifier: BACU005919, Minke Whale)

Protein Percentage 98.24%
cDNA percentage 98.12%
Ka/Ks Ratio 0.14282 (Ka = 0.0084, Ks = 0.0589)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 906 bp    Location:118301..106016   Strand:-
>bmy_11715
ATGCATCCGTTGACGCCCCTCATCACCTACAGCAACGACCACTTCTCCCCTGGCTCCCCTCCCACACACCTCTCCCCAGAGATCGATCCAAAGACAGGTGTTAATGTAGGGCCAAGGAATTGTCTGACACATCTCTCTTTGGAAGCAGGAATCCCCCGGCCCCCGCACCCATCTGAGCTGTCTCCGTATTACCCGCTGTCTCCCGGAGCTGTCGGGCAAATCCCCCATCCCCTCGGCTGGCTCGTCCCACAGCAAGGACAGCCCATGTACTCCCTTCCTCCCGGCGGCTTCCGGCACCCCTACCCTGCCCTCGCCATGAATGCCTCAATGTCCAGCCTGGTTTCCAGTCGGTTCTCCCCTCACATGGTGGCTCCGGCCCATCCTGGTCTGCCCACCTCAGGGATCCCCCACCCCGCCATCGTCTCCCCCATCGTCAAGCAGGAACCGGCGCCCCCCAGCCTGAGCCCGGCCGTGATCGCGAAATCACCCGTCACGGTGAAAAAAGAGGAAGAAAAGAAACCCCACGTGAAGAAGCCTCTTAACGCCTTCATGTTATATATGAAGGAGATGAGGGCCAAGGTGGTGGCCGAGTGCACCCTGAAGGAAAGTGCAGCCATTAACCAGATCCTGGGGAGAAAGTGGCACAACCTGTCCCGAGAAGAACAGGCCAAGTACTACGAACTGGCCCGGAAGGAGCGGCAGCTTCACTCGCAGCTCTACCCGACCTGGTCAGCCCGGGACAACTACGGTAAGAAAAAGAAGAGGAAGCGAGAAAAGCAGCTGTCCCAGACCCAGTCCCAGCAGCAAGTCCAGGAGGCAGACGGTGCTCTGGCCTCCAAAAGCAAGAAGCCATGTGTCCAGTACCTGCCCCCTGAGAAGCCCTCCAGAGTCACAGTTCTGAACTAA

Related Sequences

bmy_11715T0 Protein

Length: 302 aa     
>bmy_11715T0
MHPLTPLITYSNDHFSPGSPPTHLSPEIDPKTGVNVGPRNCLTHLSLEAGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMNASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVIAKSPVTVKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQQQVQEADGALASKSKKPCVQYLPPEKPSRVTVLN*