Sequence detailsbmy_11728 (Coding sequence)

Part of scaffold_653 (SequenceType object (1))

For more information consult the page for scaffold_653 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC10A6ENSTTRG00000006263 (Bottlenosed dolphin)

Gene Details

solute carrier family 10 (sodium/bile acid cotransporter family), member 6

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005928, Bottlenosed dolphin)

Protein Percentage 88.86%
cDNA percentage 89.66%
Ka/Ks Ratio 0.35861 (Ka = 0.0095, Ks = 0.0265)

BT.52969ENSBTAG00000016794 (Cow)

Gene Details

solute carrier family 10 member 6

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022342, Cow)

Protein Percentage 80.16%
cDNA percentage 88.23%
Ka/Ks Ratio 0.74203 (Ka = 0.122, Ks = 0.1644)

SLC10A6 (Minke Whale)

Gene Details

solute carrier family 10 (sodium/bile acid cotransporter), member 6

External Links

Gene match (Identifier: BACU006885, Minke Whale)

Protein Percentage 98.94%
cDNA percentage 99.12%
Ka/Ks Ratio 0.24352 (Ka = 0.0049, Ks = 0.0202)

Additional orthologs identified in other species via the OPTIC pipeline.

SLC10A6 (Human)   Slc10a6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1161 bp    Location:491056..470825   Strand:-
Raw sequence 
>bmy_11728
ATGAGAGCAAATTGTTCCAGCAGCTCAGCCTGCCCTGCCAACAGTTCGGAGGAGGAGTTGCCAGTGGGGCTGGAGGTCTATGGGAACCTGGAACTTGTTTTCACAGTGGTGTCAGCCGTGATGATCGGCCTGCTCATGTTCTCCTTGGGATGCTCTGTGGAGATCCGGAGGCTCTGGTCGCACATCAGGAGACCCTGGGGCATTGCTGTAGGACTGCTCTGCCAGTTTGGGCTCATGCCTCTTACTGCCTATCTCCTGGTCATCAACTTCTCTCTGAAGCCAGTCCAAGCTATGGCTATCCTCATCATGGGGTGCTGCCCAGGGGGAACCATCTCGAACATTTTCACCTACTGGGTTGATGGAGATATGGATCTCAGCGTCTACTTTAATTTTACTTTCAGCATCAGTATGACAACTTGTTCCACAGTGGTTGCCCTGGGAATGATGCCACTCTGCCTTTATCTCTACACCTTGTCCTGGAATCTTGAGCAGAATCTCACCATTCCATATCAGAACATAGGAATTACCCTTGTGTGCCTGACCATTCCTGTGGCCTTTGGTGTCTATGTGAATTATAGGTGGCCAAAACAATCCAAAATTATTCTTAAGGTTGGAGCCATTGTTGGTGGGGTCCTCCTTTTGGTGGTCGCAGTTGCTGGTGTGGTGCTGGCGAAAGGATCTTGGAATTCAGACATCATTCTTCTGACCATCAGCTTCATCTTTCCTTTGATTGGCCATGTCACAGGCTTTCTCCTGGCACTTCTTACCCACCAATCTTGGCAGAGGTGCAGGACGATTTCCTTAGAAACTGGAGCTCAGAATATTCAGATGTGCATCACCATGTTGCACTTATCTTTCACTGCCGAGCAATTAGTCCAGATGCTTAGTTTCCCACTGGCCTATGGACTCTTCCAGCTGTTGGATGGGTTTCTCATTGTTGCAGCATATAAGATGTACAAGAGGACACTGAAGAACAAACACAGAATAAAGAACCCCGCTTTAAGGGTAGAAGCCCGCTTTAAGAAGAAATCCACTTCTCCCAAAGAGACCAGTGCTTTCTTGGAGGTGAATGAAGAAGCTGCTCTAACTCCTGGGCCATCAGGGCCCATGGATCTCCACAGGGCTCTCATGCCAACTGGCCAGATCTCATGTGCCAAGTAG

Related Sequences

bmy_11728T0 SequenceType object (3)

Length: 387 aa      
>bmy_11728T0
MRANCSSSSACPANSSEEELPVGLEVYGNLELVFTVVSAVMIGLLMFSLGCSVEIRRLWSHIRRPWGIAVGLLCQFGLMPLTAYLLVINFSLKPVQAMAILIMGCCPGGTISNIFTYWVDGDMDLSVYFNFTFSISMTTCSTVVALGMMPLCLYLYTLSWNLEQNLTIPYQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKVGAIVGGVLLLVVAVAGVVLAKGSWNSDIILLTISFIFPLIGHVTGFLLALLTHQSWQRCRTISLETGAQNIQMCITMLHLSFTAEQLVQMLSFPLAYGLFQLLDGFLIVAAYKMYKRTLKNKHRIKNPALRVEARFKKKSTSPKETSAFLEVNEEAALTPGPSGPMDLHRALMPTGQISCAK*