Part of scaffold_650 (Scaffold)

For more information consult the page for scaffold_650 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UPK1B ENSTTRG00000015451 (Bottlenosed dolphin)

Gene Details

uroplakin 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014636, Bottlenosed dolphin)

Protein Percentage 72.46%
cDNA percentage 73.16%
Ka/Ks Ratio 0.39583 (Ka = 0.0138, Ks = 0.0349)

UPK1B  (Minke Whale)

Gene Details

uroplakin 1B

External Links

Gene match (Identifier: BACU020327, Minke Whale)

Protein Percentage 76.69%
cDNA percentage 81.21%
Ka/Ks Ratio 0.69955 (Ka = 0.2033, Ks = 0.2906)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 783 bp    Location:23902..37691   Strand:+
>bmy_11736
ATGGCCAAAGAGGACTCCACCGTTCGTTGCTTCCAGGGCCTGCTGATTTTTGGAAATGTGATTATTGGTATGTGCGGCATCGCCCTGACTGCAGAGTGCATCTTCTTTGTATCCGACCAACACAGCCTCTACCCGCTGCTTGAAGCCACTGACAATGATGACATCTATGGGGCAGCCTGGATTGGCATGTTTGTCGGCATCTGCCTCTTCTGCCTGTCTGTCCTGGGCATTGTAGGCATCATGAAGTCCAACAGGAAACTTCTTCTGGTGTATTTCATTCTGATGTTTATTGTATATGGCTTTGAAGTGGCATCTTGTATCACAGCAGCAACACAACGAGACTTTCTCACACCCAACCTCTTCCTGAAGCAGATGCTGGAGAGGTACCAAAACAACAGTCCTCCAAACAATGATGACCAGTGGAAAAACAATGGAGTCACCAAGACCTGGGACAGGCTCATGCTCCAGGACAATTGCTGTGGTGTAAATGGACCATCAGACTGGCAGAAATACACCTCTGCCTTCCGGACCGAGAATAACGATGCCGACTACCCCTGGCCTCGTCAGTGCTGTGTTATGAACAACCTTAAAGAACCTCTCAACCTGGAGGCCTGCAAACTAGGGGTACCTGGATACTATCACAATCAGGGCTGCTATGAACTGATCTCTGGACCAATGAACCGACACGCCTGGGGGGTTGCGTGGTTTGGATTTGCCATTCTCTGTTGGACTTTTTGGGTTCTCCTGGGTACCATGTTCTACTGGAGCAGAATTGAATATTAA

Related Sequences

bmy_11736T0 Protein

Length: 261 aa     
>bmy_11736T0
MAKEDSTVRCFQGLLIFGNVIIGMCGIALTAECIFFVSDQHSLYPLLEATDNDDIYGAAWIGMFVGICLFCLSVLGIVGIMKSNRKLLLVYFILMFIVYGFEVASCITAATQRDFLTPNLFLKQMLERYQNNSPPNNDDQWKNNGVTKTWDRLMLQDNCCGVNGPSDWQKYTSAFRTENNDADYPWPRQCCVMNNLKEPLNLEACKLGVPGYYHNQGCYELISGPMNRHAWGVAWFGFAILCWTFWVLLGTMFYWSRIEY*