Part of scaffold_670 (Scaffold)

For more information consult the page for scaffold_670 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCL25 ENSTTRG00000001590 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) ligand 25

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001499, Bottlenosed dolphin)

Protein Percentage 91.39%
cDNA percentage 95.14%
Ka/Ks Ratio 0.43594 (Ka = 0.0392, Ks = 0.09)

CCL25 ENSBTAG00000005581 (Cow)

Gene Details

C-C motif chemokine 25 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007331, Cow)

Protein Percentage 83.89%
cDNA percentage 87.25%
Ka/Ks Ratio 0.23748 (Ka = 0.0849, Ks = 0.3573)

CCL25  (Minke Whale)

Gene Details

chemokine (C-C motif) ligand 25

External Links

Gene match (Identifier: BACU002535, Minke Whale)

Protein Percentage 97.39%
cDNA percentage 98.04%
Ka/Ks Ratio 0.2659 (Ka = 0.0119, Ks = 0.0448)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 558 bp    Location:672539..669567   Strand:-
>bmy_11773
GGAGAGCTTGGGTCCACTCCAGCAGGTACCGGCTCCAGGGACCCCACTGGCTTTGTTAACCCTCAAGGCGCCGGAGGAGGAGGACCAGCCTGCACTATGAATCCGTGGCTCCTGGTCTGCCTGGTGGCCTGCTTCGTGGGTGCCTGGGCTCCCACTGTCCACGCTCAAGGTGCTTTTGAGGACTGCTGCCTGGCCTACCACAGCCCAGCAAGACGGTCCATGCTCCGGTACGCCCAGAGTTACCATCGCCAGGACGTGAGCGGGAGCTGCAACCTGCCTGCGGTGATATTCTTCTTCCCCCAGAAAAACAAGATGGTGTGTGGGAAGCCAGGGACCAGGTGGGTGCAGATTGGGATGAAGATCCTGGATGCTCGGAGGAAGACCCAGTTAAAGCCCCACCACGGCACCCGGAGAAACTTTCAAGTCCCTCATTCTGGGGTGAGGAAGTTGAGCTCTGGAACCTCCACGCTACCATTGTCGAAGTGTAGCGGTCCCACCAGAAGCAGCAAGAGGAAAACCTCTCTCCTGACAACAGCTAATCCAGGTCAGGACTCTTGA

Related Sequences

bmy_11773T0 Protein

Length: 186 aa      View alignments
>bmy_11773T0
GELGSTPAGTGSRDPTGFVNPQGAGGGGPACTMNPWLLVCLVACFVGAWAPTVHAQGAFEDCCLAYHSPARRSMLRYAQSYHRQDVSGSCNLPAVIFFFPQKNKMVCGKPGTRWVQIGMKILDARRKTQLKPHHGTRRNFQVPHSGVRKLSSGTSTLPLSKCSGPTRSSKRKTSLLTTANPGQDS*