Part of scaffold_670 (Scaffold)

For more information consult the page for scaffold_670 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAPPC5 ENSTTRG00000001644 (Bottlenosed dolphin)

Gene Details

trafficking protein particle complex 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001548, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.47%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0358)

BT.57991 ENSBTAG00000004268 (Cow)

Gene Details

trafficking protein particle complex subunit 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005590, Cow)

Protein Percentage 100.0%
cDNA percentage 95.39%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5548)

TRAPPC5  (Minke Whale)

Gene Details

trafficking protein particle complex 5

External Links

Gene match (Identifier: BACU018510, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.29%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0408)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 723 bp    Location:923680..921255   Strand:-
>bmy_11784
GGCCGCACGGACACGCGCGCCCCCGTGCGGCCACTCTCGGGAATCACAGCGCGCACCCCGCCCGTCCCGCCTCGGCGCCTGCGCACGCCGGGCCTTTTACGGCGCCGTAAAGCAGCTCGGCCGAATCGGCTGCCGCAAGTCCCGGGCAGCAGAGGCATGGAGGCGCGCTTCACGCGCGGGAAGTCGGCGCTGCTGGAGCGCGCGCTGGCCCGGCCGCGCACCGAGGTGAGCCTGAGCGCCTTCGCGCTGCTCTTCTCCGAGCTGGTGCAGCACTGCCAGAGCCGCGTCTTCTCTGTGGCGGAGCTGCAGGCTCGCCTGGCCGCGCTAGGCCGCCAGGTGGGCGCCCGCGTTCTGGATGCGCTGGTGGCTCGCGAAAAGGGCGCCCGGCGTGAAACCAAGGTGCTGGGCGCCCTGCTCTTCGTTAAGGGCGCCGTGTGGAAGGCGCTYTTCGGCAAGGAGGCCGACAAGCTGGAGCAGGCCAATGACGACGCCCGCACCTTCTACATCATCGAGCGGGAGCCGCTCATCAACACCTACATCTCCGTGCCCAAGGAGAACAGCACGCTCAACTGCGCCAGCTTCACGGCTGGCATCGTGGAGGCGGTGCTCACGCACAGTGGCTTCCCCGCCAAGGTCACGGCGCACTGGCACAAGGGCACCACGCTCATGATCAAGTTCGAGGAGGCGGTCATCGCCCGAGACCGGGCCCTGGAGGGCCGCTGA

Related Sequences

bmy_11784T0 Protein

Length: 241 aa      View alignments
>bmy_11784T0
GRTDTRAPVRPLSGITARTPPVPPRRLRTPGLLRRRKAARPNRLPQVPGSRGMEARFTRGKSALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWHKGTTLMIKFEEAVIARDRALEGR*