Part of scaffold_670 (SequenceType object (1))

For more information consult the page for scaffold_670 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAPPC5ENSTTRG00000001644 (Bottlenosed dolphin)

Gene Details

trafficking protein particle complex 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001548, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.47%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0358)

BT.57991ENSBTAG00000004268 (Cow)

Gene Details

trafficking protein particle complex subunit 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005590, Cow)

Protein Percentage 100.0%
cDNA percentage 95.39%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5548)

TRAPPC5 (Minke Whale)

Gene Details

trafficking protein particle complex 5

External Links

Gene match (Identifier: BACU018510, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.29%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0408)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 723 bp    Location:923680..921255   Strand:-
>bmy_11784
GGCCGCACGGACACGCGCGCCCCCGTGCGGCCACTCTCGGGAATCACAGCGCGCACCCCGCCCGTCCCGCCTCGGCGCCTGCGCACGCCGGGCCTTTTACGGCGCCGTAAAGCAGCTCGGCCGAATCGGCTGCCGCAAGTCCCGGGCAGCAGAGGCATGGAGGCGCGCTTCACGCGCGGGAAGTCGGCGCTGCTGGAGCGCGCGCTGGCCCGGCCGCGCACCGAGGTGAGCCTGAGCGCCTTCGCGCTGCTCTTCTCCGAGCTGGTGCAGCACTGCCAGAGCCGCGTCTTCTCTGTGGCGGAGCTGCAGGCTCGCCTGGCCGCGCTAGGCCGCCAGGTGGGCGCCCGCGTTCTGGATGCGCTGGTGGCTCGCGAAAAGGGCGCCCGGCGTGAAACCAAGGTGCTGGGCGCCCTGCTCTTCGTTAAGGGCGCCGTGTGGAAGGCGCTYTTCGGCAAGGAGGCCGACAAGCTGGAGCAGGCCAATGACGACGCCCGCACCTTCTACATCATCGAGCGGGAGCCGCTCATCAACACCTACATCTCCGTGCCCAAGGAGAACAGCACGCTCAACTGCGCCAGCTTCACGGCTGGCATCGTGGAGGCGGTGCTCACGCACAGTGGCTTCCCCGCCAAGGTCACGGCGCACTGGCACAAGGGCACCACGCTCATGATCAAGTTCGAGGAGGCGGTCATCGCCCGAGACCGGGCCCTGGAGGGCCGCTGA

Related Sequences

bmy_11784T0 SequenceType object (3)

Length: 241 aa      View alignments
>bmy_11784T0
GRTDTRAPVRPLSGITARTPPVPPRRLRTPGLLRRRKAARPNRLPQVPGSRGMEARFTRGKSALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWHKGTTLMIKFEEAVIARDRALEGR*