Sequence details bmy_11809 (Coding sequence)

Part of scaffold_654 (Scaffold)

For more information consult the page for scaffold_654 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM62 ENSTTRG00000010910 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 62

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010331, Bottlenosed dolphin)

Protein Percentage 99.68%
cDNA percentage 98.51%
Ka/Ks Ratio 0.01244 (Ka = 0.0013, Ks = 0.1016)

TRIM62 ENSBTAG00000020671 (Cow)

Gene Details

tripartite motif-containing protein 62

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027551, Cow)

Protein Percentage 84.4%
cDNA percentage 83.38%
Ka/Ks Ratio 0.11699 (Ka = 0.1108, Ks = 0.9468)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM62 (Human)   Trim62 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1185 bp    Location:236530..252584   Strand:+
Raw sequence 
>bmy_11809
ATGGCCAGAGAGGAGGCTGTTGCAAAGCCCCAGATGGAAGATGGGAACAGACTCCGGAGATACTTAGGAGACAGACTCTGCGGAACGTGGTGGTTGTTAAACTGTGAAGGGAGGCGGGTGCTGGGGCAGGAGACGGACGGGGCCAGGATAGCTTCCAGCGCCCGCAGTGGACGGGCCTGGGCTCTGCATCACCACGGAATACCCGGGCCGGCTCTGGCCCGCGCCCCCATCCCCGATCTTAGGGAGCTGAAGGAGCAGCTTCAGGCCCTTCAGGACAGTGAGCGGGAGCACACGGAGGCGCTGCAGCTGCTCAAGCGACAGCTGGCGGAGACCAAGCGGCTGCACCGGTTGCTGCGGGAACGGCAGAAGGCCATGCTGGAGGAGCTAGAGGCAGACACGGCCCGCACACTGACTGACATTGAGCAGAAAGTCCAGCGCTATAGCCAGCAGCTGCGCAAGGTGCAGGAGGGGGCCCAGATCCTGCAGGAGCGGCTGGCTGAAACTGACCGGCACACCTTCCTGGCCGGGGTGGCCTCGCTGTCTGAGCGGCTCAAAGGGAAAATCCATGAGACCAATCTGACCTACGAAGACTTCCCAACCTCCAAGTACACAGGCCCCCTGCAGTACACCATCTGGAAGTCCCTGTTCCAGGACATCCACCCAGTGCCAGCCGCCCTGACCCTGGACCCGGGCACCGCCCACCAGCGCCTCATCCTGTCGGACGACTGCACCATCGTGGCCTACGGCAACCTGCACCCACAGCCGCTGCAGGACTCACCCAAGCGCTTCGACGTGGAGGTGTCGGTGCTGGGCTCTGAGGCCTTCAGTGGCGGCGTCCACTACTGGGAGGTGGTGGTGGCGGAGAAGACCCAGTGGGTGATCGGGCTGGCACACGAAGCCGCGAGCCGTAAGGGCAGCATCCAGATCCAGCCTAGCCGCGGCTTCTACTGCATCGTCATGCACGACGGCAACCAGTACAGCGCCTGCACCGAGCCCTGGACGCGGCTCAATGTCCGCGACAAGCTCGACAAGGTGGGCGTCTTCCTGGACTACGACCAAGGCCTGCTCATCTTCTATAACGCCGATGACATGTCTTGGCTGTACACCTTCCGCGAGAAGTTCCCCGGCAAGCTCTGCTCCTACTTCAGCCCCGGGCAGAGCCACGCCAATGGCAAGAACGCCTAA

Related Sequences

bmy_11809T0 Protein

Length: 395 aa      View alignments
>bmy_11809T0
MAREEAVAKPQMEDGNRLRRYLGDRLCGTWWLLNCEGRRVLGQETDGARIASSARSGRAWALHHHGIPGPALARAPIPDLRELKEQLQALQDSEREHTEALQLLKRQLAETKRLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETDRHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLDPGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSGGVHYWEVVVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFLDYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNA*