Sequence detailsbmy_11809 (Coding sequence)

Part of scaffold_654 (SequenceType object (1))

For more information consult the page for scaffold_654 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM62ENSTTRG00000010910 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 62

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010331, Bottlenosed dolphin)

Protein Percentage 99.68%
cDNA percentage 98.51%
Ka/Ks Ratio 0.01244 (Ka = 0.0013, Ks = 0.1016)

TRIM62ENSBTAG00000020671 (Cow)

Gene Details

tripartite motif-containing protein 62

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027551, Cow)

Protein Percentage 84.4%
cDNA percentage 83.38%
Ka/Ks Ratio 0.11699 (Ka = 0.1108, Ks = 0.9468)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM62 (Human)   Trim62 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1185 bp    Location:236530..252584   Strand:+
Raw sequence 
>bmy_11809
ATGGCCAGAGAGGAGGCTGTTGCAAAGCCCCAGATGGAAGATGGGAACAGACTCCGGAGATACTTAGGAGACAGACTCTGCGGAACGTGGTGGTTGTTAAACTGTGAAGGGAGGCGGGTGCTGGGGCAGGAGACGGACGGGGCCAGGATAGCTTCCAGCGCCCGCAGTGGACGGGCCTGGGCTCTGCATCACCACGGAATACCCGGGCCGGCTCTGGCCCGCGCCCCCATCCCCGATCTTAGGGAGCTGAAGGAGCAGCTTCAGGCCCTTCAGGACAGTGAGCGGGAGCACACGGAGGCGCTGCAGCTGCTCAAGCGACAGCTGGCGGAGACCAAGCGGCTGCACCGGTTGCTGCGGGAACGGCAGAAGGCCATGCTGGAGGAGCTAGAGGCAGACACGGCCCGCACACTGACTGACATTGAGCAGAAAGTCCAGCGCTATAGCCAGCAGCTGCGCAAGGTGCAGGAGGGGGCCCAGATCCTGCAGGAGCGGCTGGCTGAAACTGACCGGCACACCTTCCTGGCCGGGGTGGCCTCGCTGTCTGAGCGGCTCAAAGGGAAAATCCATGAGACCAATCTGACCTACGAAGACTTCCCAACCTCCAAGTACACAGGCCCCCTGCAGTACACCATCTGGAAGTCCCTGTTCCAGGACATCCACCCAGTGCCAGCCGCCCTGACCCTGGACCCGGGCACCGCCCACCAGCGCCTCATCCTGTCGGACGACTGCACCATCGTGGCCTACGGCAACCTGCACCCACAGCCGCTGCAGGACTCACCCAAGCGCTTCGACGTGGAGGTGTCGGTGCTGGGCTCTGAGGCCTTCAGTGGCGGCGTCCACTACTGGGAGGTGGTGGTGGCGGAGAAGACCCAGTGGGTGATCGGGCTGGCACACGAAGCCGCGAGCCGTAAGGGCAGCATCCAGATCCAGCCTAGCCGCGGCTTCTACTGCATCGTCATGCACGACGGCAACCAGTACAGCGCCTGCACCGAGCCCTGGACGCGGCTCAATGTCCGCGACAAGCTCGACAAGGTGGGCGTCTTCCTGGACTACGACCAAGGCCTGCTCATCTTCTATAACGCCGATGACATGTCTTGGCTGTACACCTTCCGCGAGAAGTTCCCCGGCAAGCTCTGCTCCTACTTCAGCCCCGGGCAGAGCCACGCCAATGGCAAGAACGCCTAA

Related Sequences

bmy_11809T0 SequenceType object (3)

Length: 395 aa      View alignments
>bmy_11809T0
MAREEAVAKPQMEDGNRLRRYLGDRLCGTWWLLNCEGRRVLGQETDGARIASSARSGRAWALHHHGIPGPALARAPIPDLRELKEQLQALQDSEREHTEALQLLKRQLAETKRLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETDRHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLDPGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSGGVHYWEVVVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFLDYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNA*