Part of scaffold_654 (Scaffold)

For more information consult the page for scaffold_654 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM54 ENSTTRG00000013864 (Bottlenosed dolphin)

Gene Details

transmembrane protein 54

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013147, Bottlenosed dolphin)

Protein Percentage 95.61%
cDNA percentage 97.24%
Ka/Ks Ratio 0.40376 (Ka = 0.0209, Ks = 0.0519)

TMEM54 ENSBTAG00000008331 (Cow)

Gene Details

Transmembrane protein 54

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000037867, Cow)

Protein Percentage 92.2%
cDNA percentage 92.68%
Ka/Ks Ratio 0.16803 (Ka = 0.0372, Ks = 0.2215)

TMEM54  (Minke Whale)

Gene Details

transmembrane protein 54

External Links

Gene match (Identifier: BACU009634, Minke Whale)

Protein Percentage 98.54%
cDNA percentage 99.35%
Ka/Ks Ratio 1.11644 (Ka = 0.0069, Ks = 0.0062)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 618 bp    Location:446343..449832   Strand:+
>bmy_11813
ATGAAGACGGGGCTGGTGCTGGTGGTGCTGGGCCACGTGAGCTTCATCGCAGCCGCTCTCCTCCACGGCACGGTGCTGCGCCATGTGGCAGCCCCCCATGATGCTGTGGCTCTGCAGTACTGTGTGGTCAACATCCTCTCTGTCACTTCCGCCATCTTGGTCATCACCTCAGGCATTGCAGTCATCGTGTTATCACGCTACCTCCCCAGCATCCCTCTGCGCTGGACAGTGTTTAGCTCGAGCGTGGCCTGTGCCCTTCTCTCTCTGACCTGTGCTCTCGGCCTCTTGGCCTCGATTGCTGTGACCTTTGCCACCCAGGGCCGGGCACTGCTGGCCGCCTGTACTTTTGGGGGCCCCGAACTACTGGCACTGGCGCCCGACTGTCCCTTCGACCCCACTCGCATTTACAGCTCCAGCCTGTGTCTCTGGGGCATCTCGTTACTGTTCTGCGTGGCAGAGAGTGTGTTTGCTGTCCGCAGTGCCCAGATCACCCACCAGTTGCTGGAACTGAGGCCCTGGTTGGGGAAAAGCAGCCATCACATGATGCGGGAGAGCCCAGAGCCTGTGGAGGACCATGACCTGCCGAGCTGCACTAGCTCTGGGCTGATGACCCTTTGA

Related Sequences

bmy_11813T0 Protein

Length: 206 aa      View alignments
>bmy_11813T0
MKTGLVLVVLGHVSFIAAALLHGTVLRHVAAPHDAVALQYCVVNILSVTSAILVITSGIAVIVLSRYLPSIPLRWTVFSSSVACALLSLTCALGLLASIAVTFATQGRALLAACTFGGPELLALAPDCPFDPTRIYSSSLCLWGISLLFCVAESVFAVRSAQITHQLLELRPWLGKSSHHMMRESPEPVEDHDLPSCTSSGLMTL*