Part of scaffold_654 (SequenceType object (1))

For more information consult the page for scaffold_654 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM54ENSTTRG00000013864 (Bottlenosed dolphin)

Gene Details

transmembrane protein 54

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013147, Bottlenosed dolphin)

Protein Percentage 95.61%
cDNA percentage 97.24%
Ka/Ks Ratio 0.40376 (Ka = 0.0209, Ks = 0.0519)

TMEM54ENSBTAG00000008331 (Cow)

Gene Details

Transmembrane protein 54

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000037867, Cow)

Protein Percentage 92.2%
cDNA percentage 92.68%
Ka/Ks Ratio 0.16803 (Ka = 0.0372, Ks = 0.2215)

TMEM54 (Minke Whale)

Gene Details

transmembrane protein 54

External Links

Gene match (Identifier: BACU009634, Minke Whale)

Protein Percentage 98.54%
cDNA percentage 99.35%
Ka/Ks Ratio 1.11644 (Ka = 0.0069, Ks = 0.0062)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 618 bp    Location:446343..449832   Strand:+
>bmy_11813
ATGAAGACGGGGCTGGTGCTGGTGGTGCTGGGCCACGTGAGCTTCATCGCAGCCGCTCTCCTCCACGGCACGGTGCTGCGCCATGTGGCAGCCCCCCATGATGCTGTGGCTCTGCAGTACTGTGTGGTCAACATCCTCTCTGTCACTTCCGCCATCTTGGTCATCACCTCAGGCATTGCAGTCATCGTGTTATCACGCTACCTCCCCAGCATCCCTCTGCGCTGGACAGTGTTTAGCTCGAGCGTGGCCTGTGCCCTTCTCTCTCTGACCTGTGCTCTCGGCCTCTTGGCCTCGATTGCTGTGACCTTTGCCACCCAGGGCCGGGCACTGCTGGCCGCCTGTACTTTTGGGGGCCCCGAACTACTGGCACTGGCGCCCGACTGTCCCTTCGACCCCACTCGCATTTACAGCTCCAGCCTGTGTCTCTGGGGCATCTCGTTACTGTTCTGCGTGGCAGAGAGTGTGTTTGCTGTCCGCAGTGCCCAGATCACCCACCAGTTGCTGGAACTGAGGCCCTGGTTGGGGAAAAGCAGCCATCACATGATGCGGGAGAGCCCAGAGCCTGTGGAGGACCATGACCTGCCGAGCTGCACTAGCTCTGGGCTGATGACCCTTTGA

Related Sequences

bmy_11813T0 SequenceType object (3)

Length: 206 aa      View alignments
>bmy_11813T0
MKTGLVLVVLGHVSFIAAALLHGTVLRHVAAPHDAVALQYCVVNILSVTSAILVITSGIAVIVLSRYLPSIPLRWTVFSSSVACALLSLTCALGLLASIAVTFATQGRALLAACTFGGPELLALAPDCPFDPTRIYSSSLCLWGISLLFCVAESVFAVRSAQITHQLLELRPWLGKSSHHMMRESPEPVEDHDLPSCTSSGLMTL*