Part of scaffold_669 (Scaffold)

For more information consult the page for scaffold_669 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDCBP ENSTTRG00000003741 (Bottlenosed dolphin)

Gene Details

syndecan binding protein (syntenin)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003512, Bottlenosed dolphin)

Protein Percentage 78.29%
cDNA percentage 77.94%
Ka/Ks Ratio 0.18974 (Ka = 0.0159, Ks = 0.0839)

SDCBP ENSBTAG00000019910 (Cow)

Gene Details

syntenin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026526, Cow)

Protein Percentage 96.09%
cDNA percentage 90.98%
Ka/Ks Ratio 0.05916 (Ka = 0.0206, Ks = 0.3482)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 930 bp    Location:54331..73122   Strand:+
>bmy_11860
ATGATGGAGCCGTTGTCCTCTGCACAGATGCAGTGCACTGTTGGCTTGTTGGTGGTGGAGGGGACTCAGGAAAATCCTGCAAAAATGTCTCTGTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATTCAGGCTCAAACTGCCTTTTCTGCAAACCCTGCCAACCCAGCAATTCTGTCTGAAGCTTCTGCTCCCATCTCTCAGGATGGAAATCTCTATCCTAAACTGTATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATGAAGAAGAAATACGTGCAAATATGGCCATGGTCCCTGGAGCACCAAGTCAGGGGCAGTTGGTAGCAAGAGCTTCCAGTATGAACTATATGGTGGCTCCTGTAACTGGTAATGATACTGGAATCCGCAGAGCAGAAATTAAGCAAGGGATTCGGGAAGTCATTTTGTGTAAGGATCAAGATGGAAAAATTGGGCTCAGGCTTAAATCCATAGATAATGGTGTATTCGTTCAGCTGGTCCAGGCAAATTCTCCGTCCTCGTTGGTCGGCCTGCGATTCGGGGACCAGGTGCTCCAGATCAACGGGGAGAACTGTGCCGGCTGGAGCTCCGACCGAGCACACAAGGTGCTCAAACAGGCTTTTGGAGAGAAGATTACTATGACCATTCGTGACAGGCCCTTTGAACGGACAATTACCATGCATAAGGACAGTACTGGACATGTTGGCTTTGTCTTTAAAAATGGGAAAATCACATCCATAGTGAAAGACAGTTCTGCAGCTAGAAACGGTCTTCTCACGGAACACAGCATCTGTGAGGTCAACGGACAGAATGTCATTGGACTGAAGGACTCTCAAATCGCAGACATACTGTCAACAGCTGGGAACGTAGTTACTATTACAATCATGCCTGCTTTTATATTTGAACATATTATTAAACGGTAA

Related Sequences

bmy_11860T0 Protein

Length: 310 aa      View alignments
>bmy_11860T0
MMEPLSSAQMQCTVGLLVVEGTQENPAKMSLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPISQDGNLYPKLYPELSQYMGLSLNEEEIRANMAMVPGAPSQGQLVARASSMNYMVAPVTGNDTGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGVFVQLVQANSPSSLVGLRFGDQVLQINGENCAGWSSDRAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGFVFKNGKITSIVKDSSAARNGLLTEHSICEVNGQNVIGLKDSQIADILSTAGNVVTITIMPAFIFEHIIKR*