Part of scaffold_661 (Scaffold)

For more information consult the page for scaffold_661 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SOX13 ENSTTRG00000008767 (Bottlenosed dolphin)

Gene Details

SRY (sex determining region Y)-box 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008315, Bottlenosed dolphin)

Protein Percentage 89.54%
cDNA percentage 89.38%
Ka/Ks Ratio 0.17878 (Ka = 0.0139, Ks = 0.0779)

SOX13 ENSBTAG00000008132 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010692, Cow)

Protein Percentage 92.51%
cDNA percentage 92.73%
Ka/Ks Ratio 0.10952 (Ka = 0.0327, Ks = 0.2982)

SOX13  (Minke Whale)

Gene Details

SRY (sex determining region Y)-box 13

External Links

Gene match (Identifier: BACU001095, Minke Whale)

Protein Percentage 99.84%
cDNA percentage 99.35%
Ka/Ks Ratio 0.02198 (Ka = 0.0007, Ks = 0.0311)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1845 bp    Location:232578..222142   Strand:-
>bmy_11871
ATGTCCATGAGGAGCCCCGGCTCTGCCCAGCTGGCCCTGGATGACGTTGGCACCATGGTGAACTGTACTGTCAAGTCAGAGGGGAAGAAGGAGCCCTGCCACGAGGCCCCGCAGGGCTTGGCCACCGCAGCTGAACCCCAGCCCGGAGATCCAGCCCGGGCCCCCCAGGATGGTGCTGACCCTCAAGCTCCAGCCCAGGACAGCAGCTCCCTGGAAAGCAATGGGTCCCCAGAACCCAAGAGACCAGGAGTCTCCGAGGCTGCTTCTGGAAGCCAGGAGAAGCTGGACTTCAACCGAAATTTAAAAGAAGTCGTGCCGGCCATCGAGAAGCTGCTGTCCAGTGACTGGAAGGAGAGGTTTCTGGGAAGGAGCTGTGTGGAAACCAAAGATGTCAAAGGGACCCAGGAGAGCCTGGCAGAGAAGGAGCTGCAGCTGCTGGTCATGATCCATCAGCTGTCCACCCTGCGGGACCAGCTCCTGACGGCCCACTCGGAGCAGAAGAACATGGCCGCTATGCTCTTTGAGAAGCAGCAGCAGCAGATGGAGCTGGCCCGGCAGCAGCAGGAGCAGATCGCTAAGCAGCAGCAACAGCTGATTCAGCAGCAGCATAAGATCAACCTCCTTCAGCAGCAGATCCAGGTCAACATGCCTTACGTCATGATTCCAGCCTTCCCCCCAAGCCACCAACCTCTACCTGTCACCCCCGACTCCCAGCTGGCTTTGCCCATTCAGCCCATTCCCTGCAAGCCAGTGGAGTATCCGCTGCAGCTGCTGCACAGCCCCGCCGCCCCAGTGGTGAAGAGGCCTGGGGCCTTGTCTGCCCACCACCCCCTACAGGAGCCCTCCCAACCCCTGAACCTCACGGCCAAGCCCAAGGCCCCCGAGCTGCCTAATGCCTCCAGCTCCCCGAGCCTGAAGATGAGCAACTGTGGACCCCGTCCTCCCAGCCATGGGGCCCCCACACGGGACCTGCAGGCCAGCCCTCCCAGCCTGCCTTTGGGCTTCCTTGGTGAAGGGGATGCTGTCACCAAAGCCATCCAGGATGCCAGACAGCTGCTGCACGGTCACAGTGGAGCCTTAGAAAGTTCCCCCAACACCTCCTTCCGTAAGGACCTCATTAGCCTGGACACATCCCCAGCCAAGGAGCGGCTGGAGGAGAGCTGTGTGCACCCACTGGAAGAAGCCATGCTGGGCTGTGATGTGGACGGCTCCCGCCACTTCCCTGAGTCCCGGAACAGCAGCCACATCAAGAGGCCCATGAATGCCTTCATGGTGTGGGCCAAGGATGAGAGGAGGAAGATCCTCCAGGCCTTCCCAGACATGCACAATTCCAGCATCAGCAAGATCCTTGGCTCCCGCTGGAAGTCCATGACCAACCAGGAGAAGCAGCCTTACTACGAGGAGCAGGCGAGGCTGAGCCGGCAGCACCTGGAGAAGTACCCTGACTACAAGTACAAGCCACGGCCCAAGCGCACCTGCATCGTGGAGGGCAAGCGGCTGCGGGTGGGCGAGTACAAGGCTCTGATGAGGACCCGGCGCCAGGATGCCCGCCAGAGCTACACGACCCCCCCGCAGGCCAGCCAGGTGCAGATGAGCCCCTCAGATGTCCTGTACCCTCGGGTGGCAGGCGTGCCCCTGGCACAGCCCCTGGTGGAGCACTATGTGCCCCGTGGCCTGGACCCAAACATGCCTGTCATCGTCAATACCTGCAGCCTCAGGGAGGAGGGCGAGGGCACAGAGGACAGGCACTCGGTGGCTGATGGCGAGATGTACCGGTACAGCGAGGATGAGGACTCGGAGGCCGAGGAGAAGAGCGACGGGGAGCTGGTGGTACTCACAGACTGA

Related Sequences

bmy_11871T0 Protein

Length: 615 aa      View alignments
>bmy_11871T0
MSMRSPGSAQLALDDVGTMVNCTVKSEGKKEPCHEAPQGLATAAEPQPGDPARAPQDGADPQAPAQDSSSLESNGSPEPKRPGVSEAASGSQEKLDFNRNLKEVVPAIEKLLSSDWKERFLGRSCVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLQLLHSPAAPVVKRPGALSAHHPLQEPSQPLNLTAKPKAPELPNASSSPSLKMSNCGPRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGALESSPNTSFRKDLISLDTSPAKERLEESCVHPLEEAMLGCDVDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYTTPPQASQVQMSPSDVLYPRVAGVPLAQPLVEHYVPRGLDPNMPVIVNTCSLREEGEGTEDRHSVADGEMYRYSEDEDSEAEEKSDGELVVLTD*