Sequence detailsbmy_11873 (Coding sequence)

Part of scaffold_661 (SequenceType object (1))

For more information consult the page for scaffold_661 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZC3H11AENSTTRG00000006493 (Bottlenosed dolphin)

Gene Details

zinc finger CCCH-type containing 11A

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006164, Bottlenosed dolphin)

Protein Percentage 91.25%
cDNA percentage 94.31%
Ka/Ks Ratio 0.7594 (Ka = 0.0458, Ks = 0.0603)

ZC3H11AENSBTAG00000017352 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000023068, Cow)

Protein Percentage 83.2%
cDNA percentage 88.71%
Ka/Ks Ratio 0.641 (Ka = 0.1096, Ks = 0.171)

ZC3H11A (Minke Whale)

Gene Details

zinc finger CCCH-type containing 11A

External Links

Gene match (Identifier: BACU001093, Minke Whale)

Protein Percentage 96.69%
cDNA percentage 97.2%
Ka/Ks Ratio 0.45605 (Ka = 0.0222, Ks = 0.0487)

Additional orthologs identified in other species via the OPTIC pipeline.

ZC3H11A (Human)   Zc3h11a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3387 bp    Location:494295..452625   Strand:-
Raw sequence 
>bmy_11873
ATGGTGGCAGAAGGACTGGATAAAGAGGCAAAATTGCCCACGAAAAAGAAAAGAAAGAAGGGTTTGCGAATTAAGGGGAAAAGGCGACGAAAGAAACTGATCCTTGCGAAAAAGTTTAGTAAGGATTTGCGACATCTGCAGGCAAGGCATTCACCTCACTGGACCAGGGCCAACAAATTTGGAGTTACTAGTGGGGAGGAGGATTTTACTTTGGATGTACCTTTATCTCCCTCTTCCGCTGGAAGCAGTGGAAGCTTTGAATATATCCCTACTGATCCATTGGATAATAATGGAATGGGAAAGAAACGTGATAAATCAGTATCTGATGCCCTAAGGGCAGAAAGAGGGAGATTTCTCATCAAAATTGCCAACAAAGACAGTGGTGCAGTTGGAAATGGATTAGATGAAGCTGAGACTGAGAGAAATGATCTCTTGAGTGATACTTTGCCTGGAGAGAAGTCTACAGGCAGCCAGGATGTAACAGCTGAGGACCTTAAGCAAGACACTCTAATGCATGCACAGGAACAAGAAACAACATATTGTGAAAATTCAACCTCAAGTCAAATAAGTCAGGCAATTATTCAAATGATTGTGGAAGATATGCATCCTTACAACTATTTCTCAACTCCAGCCTTTCAGAGGTTCATGCAGATTGTGGCCCCTGACTATAGGTTACCATCTGAAACTTACTTTTTCACTAAGGCTGTGCCTCAGTTATATGATTGGACTACACCTTCTTCCAGTAATGGCAGGATCCCCAATTTTAGAAAGTGGGCAGTTCTCTGTGTAACAGGATTGGCCAAAGACTGTTTGATAACCAACATTTTACAAGAATTAAATGACCAGATTGGTCTGTGGCTTTCTCCTAATTTCCTCATCCCTAGCTTCATCGTTTCCGACAATTCTTCTAATAAACTCAGAGAAGATTTTCAAGTTAGAGGTGCTGATTTGGAAACATACAAGCAGATGCTAGCAGAAGAAGTTTGTAACTATATGGAATCTTCATCAGAGGTCTGCCATATTGCAACTTCAGAAGCTTCTGGTTCCTCAGCCATAGTAGGAGCTGATTCATTTACCTCATCTATAAGAGAAGGCACCTCCAGTTCAGGGTCTGTTGATAGTTCAGCTGCAGATAATGTTGCCATTGGAGGCAAAAGCTTCATGTTTCCTTCTGCTATGGCAGTAGTGGATGAATACTTCAATGAGAAGTATTCAGAGACCTCAGGAGGTGATGACCCTTTGATTTACTGGCAGAAGAAGGGTGACAGCTGTCCATTCCGTCACTGTGAAGCTGCATTAGGCAATGAAACTGTTTGCACATTATGGCAGGAAGGGCGCTGTTTTCGACAGGTGTGCAGGTTTCGGCACATGGAGATTGATATGTTATATGCTGTGTTGCCCACTGTGCCTGAGTCACCAGAAGAGGAAGTGAAGGCTGGCCAGCTCACAGTTCAGCAGAACAAATTATCTGTCCAGTCTAATCCCTCTCCTCAACTGCGAAGTGTTATGAAAGTGGAAAGTTCAGAAAATGTTCCTAGCCCTACACATCCACCAGTGGTAATCAATGCTGCAGATGATGATGAAGATGATGATGATCAGTTTTCTGAGGAAGGTGATGAAACCAAAACACCTACCCTGCAACCAACTCCTGAAGTTCATAACGGATTACGAGTGGCTTCTGCCCGGAAACCTGGGGTCAATTTAAAACAAGGTGAATGTTTGAATTTTGGGATAAAAACTCTTGAAGAAATTAAATCAAAGAAAATGAAGGAAAAATCAAAGAAGCAAGGTGAAGGTTCTTCGGGAGTTTCCAGTCTTTTACTTCAACCACAGCCCATTCCAGGTCCTGAAAAAGAGAATGTCCGGACTGTGGTGAGGACAGTAACTCTGTCCAACAAACAAGGTGGTGACAGTGATCCTCCATTAAAGCGTAGCCTTGCACAAAGGCTAGGGAAGAAAGTTGAAGCTCCAGAGACTAACACTGACAGAACACCAAAGAAAGCAGAGAGAGTTACTAAAGTTGGTGAGATCCACGTGAAGACATTAGAAGAAATTCTTCTCGAAAGAGCCAGTCAGAAACGTGGAGAATTGCAAACTAAACTCAAGACAGAAGGACCTTCAAAAGTTGATGATTCTACAACAGGAACAAGAACCTCCTCCACTATCCGAATCAAAACGTTTTCTGAGGTCTTGGCTGAAAAGAAACATCGGCAGCAGGAAGCAGAGAGACAAAAAAGCAGAAAGGACGTAACCTGCATCAAGCTAAAGACTGATAATGAAATTAAAAAAACAGTGGTTTTGCCACCTGTAGTAGCCAGCAGAGGACAATCAGAGGAACCTGCAGGTAGAGCGAAGTCTATGCAGGAAGTGCATATCAAGACGCTGGAGGAAATTAAACTGGAGAAGGCTCTGAGGATGCAGCAGAGTTCTGAGAGCAGCACCAGCTCCCAGCCTCAGCCTGAGGCCACCCCTGGGGCAAGACGGCTTCTCCAGATCACTAAAAAAACAGGTATAAAAGAAGAGAGGAAACTTAAAGAAGAAAGTGTTGTTGCTTCTCAGAGCAGTGTTACTAGAACAGAGGCTAAAGAGACTTCAGATGAGACCACAGCAGTTGACATCACTAAAATTCAAGTCAAGAGATGTGAGACAGTGAGAGAAAAGCATGTGCAGAAACTGTCGGAGAAGGGAACCTCACAGAAGGAAAAATCAGTTTTGACACTCCTTCGGGGAGATTTAGACACTTGCAATACCCAGTTAGCAGAGAAACCAGTGCTCACTACCGTGCCAGACATCACACGGCTCCTGACTAAACGGCCTCCTTCAAAATTACCCCAGAAGACAGAGGTAGAAACCTCAGGGACTGGGGACTCAAAACTGAATGTGAAAGCTAAACCTAAACCTAAAGTGAATGTGAAGCCATCTGTGGTTAAAGCTGTCTCATCACCCAGACGGGCCCCAAAACGCAAGGCAGTGGAGGTCCACTCTGCTGTCATTGCAGCTGTGAAACCACTCACCTCCAGCAGTGTCTTGCAGAAAAGCCCAGCGAAAAAAGCAGCTGTGGCTGTTGTCCCACTTCTCTCTGAAGACAAATCAGTCACTGTGCCTGAGACAGAAAAACCTAGAGACAGTTTTGTGCTGCCTCCAACCCAGTCCTCTTCAGATCCTTCCCCACCAGAAGTATCTGGCCCTTCCTCATCCCAGGTGGCCGCAAAAACTCGCCGACTCAGCTCTGCCTCAACAGGAAAGCCCCTACTCTCTATGGAGGATGATTTTGAGAAATTAATATGGGAGATTTCAGGAGGCAAATTAGAAGCTGAGATTGACCTAGATCCTGGGAAGGATGAAGATGACCTTCTGCTTGAGCTATCAGAAATGATTGATAGCTGA

Related Sequences

bmy_11873T0 SequenceType object (3)

Length: 1129 aa      View alignments
>bmy_11873T0
MVAEGLDKEAKLPTKKKRKKGLRIKGKRRRKKLILAKKFSKDLRHLQARHSPHWTRANKFGVTSGEEDFTLDVPLSPSSAGSSGSFEYIPTDPLDNNGMGKKRDKSVSDALRAERGRFLIKIANKDSGAVGNGLDEAETERNDLLSDTLPGEKSTGSQDVTAEDLKQDTLMHAQEQETTYCENSTSSQISQAIIQMIVEDMHPYNYFSTPAFQRFMQIVAPDYRLPSETYFFTKAVPQLYDWTTPSSSNGRIPNFRKWAVLCVTGLAKDCLITNILQELNDQIGLWLSPNFLIPSFIVSDNSSNKLREDFQVRGADLETYKQMLAEEVCNYMESSSEVCHIATSEASGSSAIVGADSFTSSIREGTSSSGSVDSSAADNVAIGGKSFMFPSAMAVVDEYFNEKYSETSGGDDPLIYWQKKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDMLYAVLPTVPESPEEEVKAGQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPTLQPTPEVHNGLRVASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSNKQGGDSDPPLKRSLAQRLGKKVEAPETNTDRTPKKAERVTKVGEIHVKTLEEILLERASQKRGELQTKLKTEGPSKVDDSTTGTRTSSTIRIKTFSEVLAEKKHRQQEAERQKSRKDVTCIKLKTDNEIKKTVVLPPVVASRGQSEEPAGRAKSMQEVHIKTLEEIKLEKALRMQQSSESSTSSQPQPEATPGARRLLQITKKTGIKEERKLKEESVVASQSSVTRTEAKETSDETTAVDITKIQVKRCETVREKHVQKLSEKGTSQKEKSVLTLLRGDLDTCNTQLAEKPVLTTVPDITRLLTKRPPSKLPQKTEVETSGTGDSKLNVKAKPKPKVNVKPSVVKAVSSPRRAPKRKAVEVHSAVIAAVKPLTSSSVLQKSPAKKAAVAVVPLLSEDKSVTVPETEKPRDSFVLPPTQSSSDPSPPEVSGPSSSQVAAKTRRLSSASTGKPLLSMEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS*