Part of scaffold_661 (Scaffold)

For more information consult the page for scaffold_661 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OPTC ENSTTRG00000013312 (Bottlenosed dolphin)

Gene Details

opticin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012627, Bottlenosed dolphin)

Protein Percentage 92.12%
cDNA percentage 95.55%
Ka/Ks Ratio 0.70638 (Ka = 0.0421, Ks = 0.0596)

OPTC ENSBTAG00000013764 (Cow)

Gene Details

Opticin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018286, Cow)

Protein Percentage 87.54%
cDNA percentage 90.03%
Ka/Ks Ratio 0.2642 (Ka = 0.0679, Ks = 0.2569)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:760598..755069   Strand:-
>bmy_11876
ATGAAGCTCCTGGCCTTACTCAGCCTGCTGGCCCTGATGCTGCAGGAAGCAGGGACAGCATCTCTCCCAAAGACGGAGAGGGAGAGGGAAGGAGACCAGCTGCAAGGGGAAGGCGATTCTTATGCAGTTCTGCATCTGGGGGACTATGTCCTGAGCCTGGACAACTACGATCAGGTCATTGACCTGAGCAACTATGATGAACTCACAGACTACAGGGACCAGCTCCTCAAGGTTAAAGGGACCAGCCTGGCTTCTCCAACCAGGACAAGTTTCACTCAGAGCACAAAGGCTCCAAGGACACCCCCTTCAAACCCCACAATGGCCAGGCCTAGGACGCTGGGCCTGCTGGTTTCCCCGACCAGCCACGGCCTGCCAACCTGTCTGATCTGCGTGTGCCTTGGTTCCTCTGTGTACTGTGACGATGCTGACCTAGAGGACATCCCTCCTCTTCCCCAGACAACCGCTTACCTGTACGCCCGCTTCAACCGCATCAGCCATATTCGGGCTGGAGACTTCAAAGGGCTGACAAAACTGAAGAGGATTGACCTCTCTAGCAATTCCATCTCCTCCATCGATGACGATGCCCTCCTCCTGCTGCCTGCTCTGCAGGATCTGATCCTCCCTGAGAACAAGCTGGCAGCGCTACCTGTGCTGCCCACTGGCATTGAGGTCCTGGACATCCGCCTGAACCGGCTCCGGAGCTCAGGGATACAGCCTGAAGCCTTCAGGGCGCTGGAGAAGCTGCAGTTCCTCTACCTGGCCGATAACCTGCTGGACTCCATCCCCAGGTCCCTGCCCCTGAGCCTGCGCTCACTACACCTGCAGAATAACATGATAGAGACCATGCAGAGGGACACCTTCTGTGACGCTGAGGAGCACAAACACACCCGGAGGCAGCTGGAAGACATCCGCCTGGACGGCAATCCCATCAACCTGAGCCTCTTCCCCAGTGCCTACTTCTGCCTGCCTCGGCTCCCCACGGGCCGCTTCACCTAG

Related Sequences

bmy_11876T0 Protein

Length: 332 aa      View alignments
>bmy_11876T0
MKLLALLSLLALMLQEAGTASLPKTEREREGDQLQGEGDSYAVLHLGDYVLSLDNYDQVIDLSNYDELTDYRDQLLKVKGTSLASPTRTSFTQSTKAPRTPPSNPTMARPRTLGLLVSPTSHGLPTCLICVCLGSSVYCDDADLEDIPPLPQTTAYLYARFNRISHIRAGDFKGLTKLKRIDLSSNSISSIDDDALLLLPALQDLILPENKLAALPVLPTGIEVLDIRLNRLRSSGIQPEAFRALEKLQFLYLADNLLDSIPRSLPLSLRSLHLQNNMIETMQRDTFCDAEEHKHTRRQLEDIRLDGNPINLSLFPSAYFCLPRLPTGRFT*