Part of scaffold_661 (SequenceType object (1))

For more information consult the page for scaffold_661 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OPTCENSTTRG00000013312 (Bottlenosed dolphin)

Gene Details

opticin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012627, Bottlenosed dolphin)

Protein Percentage 92.12%
cDNA percentage 95.55%
Ka/Ks Ratio 0.70638 (Ka = 0.0421, Ks = 0.0596)

OPTCENSBTAG00000013764 (Cow)

Gene Details

Opticin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018286, Cow)

Protein Percentage 87.54%
cDNA percentage 90.03%
Ka/Ks Ratio 0.2642 (Ka = 0.0679, Ks = 0.2569)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 996 bp    Location:760598..755069   Strand:-
>bmy_11876
ATGAAGCTCCTGGCCTTACTCAGCCTGCTGGCCCTGATGCTGCAGGAAGCAGGGACAGCATCTCTCCCAAAGACGGAGAGGGAGAGGGAAGGAGACCAGCTGCAAGGGGAAGGCGATTCTTATGCAGTTCTGCATCTGGGGGACTATGTCCTGAGCCTGGACAACTACGATCAGGTCATTGACCTGAGCAACTATGATGAACTCACAGACTACAGGGACCAGCTCCTCAAGGTTAAAGGGACCAGCCTGGCTTCTCCAACCAGGACAAGTTTCACTCAGAGCACAAAGGCTCCAAGGACACCCCCTTCAAACCCCACAATGGCCAGGCCTAGGACGCTGGGCCTGCTGGTTTCCCCGACCAGCCACGGCCTGCCAACCTGTCTGATCTGCGTGTGCCTTGGTTCCTCTGTGTACTGTGACGATGCTGACCTAGAGGACATCCCTCCTCTTCCCCAGACAACCGCTTACCTGTACGCCCGCTTCAACCGCATCAGCCATATTCGGGCTGGAGACTTCAAAGGGCTGACAAAACTGAAGAGGATTGACCTCTCTAGCAATTCCATCTCCTCCATCGATGACGATGCCCTCCTCCTGCTGCCTGCTCTGCAGGATCTGATCCTCCCTGAGAACAAGCTGGCAGCGCTACCTGTGCTGCCCACTGGCATTGAGGTCCTGGACATCCGCCTGAACCGGCTCCGGAGCTCAGGGATACAGCCTGAAGCCTTCAGGGCGCTGGAGAAGCTGCAGTTCCTCTACCTGGCCGATAACCTGCTGGACTCCATCCCCAGGTCCCTGCCCCTGAGCCTGCGCTCACTACACCTGCAGAATAACATGATAGAGACCATGCAGAGGGACACCTTCTGTGACGCTGAGGAGCACAAACACACCCGGAGGCAGCTGGAAGACATCCGCCTGGACGGCAATCCCATCAACCTGAGCCTCTTCCCCAGTGCCTACTTCTGCCTGCCTCGGCTCCCCACGGGCCGCTTCACCTAG

Related Sequences

bmy_11876T0 SequenceType object (3)

Length: 332 aa      View alignments
>bmy_11876T0
MKLLALLSLLALMLQEAGTASLPKTEREREGDQLQGEGDSYAVLHLGDYVLSLDNYDQVIDLSNYDELTDYRDQLLKVKGTSLASPTRTSFTQSTKAPRTPPSNPTMARPRTLGLLVSPTSHGLPTCLICVCLGSSVYCDDADLEDIPPLPQTTAYLYARFNRISHIRAGDFKGLTKLKRIDLSSNSISSIDDDALLLLPALQDLILPENKLAALPVLPTGIEVLDIRLNRLRSSGIQPEAFRALEKLQFLYLADNLLDSIPRSLPLSLRSLHLQNNMIETMQRDTFCDAEEHKHTRRQLEDIRLDGNPINLSLFPSAYFCLPRLPTGRFT*