Part of scaffold_678 (Scaffold)

For more information consult the page for scaffold_678 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC4C ENSBTAG00000007324 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009633, Cow)

Protein Percentage 99.38%
cDNA percentage 97.03%
Ka/Ks Ratio 0.02931 (Ka = 0.003, Ks = 0.1024)

LRRC4C  (Minke Whale)

Gene Details

leucine rich repeat containing 4C

External Links

Gene match (Identifier: BACU008918, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0221)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2019 bp    Location:304457..301245   Strand:-
>bmy_11888
CACAGGTGCCCAATCCATGATAAGCCAGTTGAGTGGGGTTTATACTGGGTAACACAAGCTTTGGAATTCCTCTTTGTGCCAGAAGAGTTGCGGAAAATGTTGAACAAGATGACCTTACATCCACAGCAGATAATGATAGGTCCTAGGTTGAACAGGGCCTTATTTGACCCCCTGCTTGTGGTGCTGCTGGCTCTTCAGCTTCTTGTGGTGGCTGGTCTGGTGCGGGCTCAAACCTGCCCTTCCATCTGCTCCTGCAGCAACCAGTTCAGCAAGGTGATCTGTGTGCGGAAAAACCTACGTGAGGTTCCAGATGGCATCTCCACCAACACCCGGCTGCTGAACCTCCATGAGAACCAAATCCAGATCATCAAAGTGAACAGCTTCAAGCACTTGAGGCACCTGGAAATCCTACAGTTGAGTAGGAATCATATCAGAACAATTGAAATTGGGGCCTTCAATGGTCTGGCAAACCTCAACACCCTGGAACTCTTTGACAATCGTCTTACGACCATCCCAAATGGAGCTTTTGTATATTTGTCTAAACTGAAGGAGCTCTGGTTGCGAAACAACCCCATCGAAAGCATCCCTTCTTATGCTTTTAACAGAATCCCTTCTTTGCGCCGGCTAGACTTAGGGGAATTAAAAAGGCTTTCGTATATCTCAGAAGGTGCCTTTGAAGGTCTGTCCAACTTGAGGTATTTGAACCTTGCCATGTGCAACCTCCGAGAAATCCCTAACCTCACGCCGCTCATAAAACTAGATGAGCTGGATCTTTCTGGGAATCATCTGTCTGCCATCAGGCCTGGCTCTTTCCAGGGGTTGATGCACCTTCAAAAACTGTGGATGATACAGTCCCAGATTCAAGTGATTGAACGGAATGCCTTTGATAACCTTCAGTCACTGGTGGAGATCAACCTGGCACACAACAATCTAACATTACTGCCTCATGACCTCTTCACACCCTTGCATCATCTAGAACGGATACACTTACATCACAACCCCTGGAACTGTAACTGTGACATACTGTGGCTCAGCTGGTGGATAAAAGACATGGCCCCCTCCAACACAGCTTGCTGTGCCCGGTGTAACACCCCTCCCAATCTGAAAGGGAGGTACATTGGGGAGCTTGACCAGAATTATTTCACATGCTATGCTCCTGTCATTGTGGAGCCCCCAGCAGACCTCAATGTCACTGAAGGCATGGCAGCTGAGCTGAAATGTCGGGCCTCCACGTCCCTGACTTCTGTATCTTGGATTACTCCAAACGGAACAGTCATGACACATGGGGCGTACAAAGTGCGGATAGCCGTGCTCAGCGATGGCACGTTAAACTTCACGAATGTAACCGTGCAAGATACAGGCATGTACACGTGTATGGTGAGTAATTCTGTTGGAAATACCACTGCTTCGGCCACCCTGAATGTTACTGCAGCAAACACTACTCCCTTCTCATACTTTTCAACCGTCACAGTAGAGACTATGGAACCTTCTCAGGATGAGGCAAGGACCACAGATAACAATGTGGGTCCCACTCCGGTGATCGACTGGGAGACCACCAACGTGACCACCTCTCTCACGCCACAGAGCACAAGGTCAACAGAAAAAACATTCACCATCCCCGTGACTGATATAAACAGTGGGATCCCAGGAATCGATGAAGTCATGAAGACTACCAAAATCATCATTGGCTGTTTTGTGGCCATCACGCTCATGGCTGCAGTGATGCTGGTCATTTTCTACAAGATGAGGAAGCAGCACCATCGGCAAAACCATCATGCCCCAACGAGGACTGTTGAAATCATTAATGTGGATGATGAGATTACAGGAGACACACCCATGGAAAGCCACCTGCCCATGCCTGCTATTGAGCATGAGCACCTAAACCACTACAACTCTTACAAATCTCCCTTCAACCACACAACTACAGTTAACACAATAAATTCAATACACAGTTCAGTGCATGAACCGTTATTGATCCGAATGAACTCTAAAGACAATGTCCAAGAGACTCAAATCTAA

Related Sequences

bmy_11888T0 Protein

Length: 673 aa      View alignments
>bmy_11888T0
HRCPIHDKPVEWGLYWVTQALEFLFVPEELRKMLNKMTLHPQQIMIGPRLNRALFDPLLVVLLALQLLVVAGLVRAQTCPSICSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTAANTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTPVIDWETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMAAVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNSYKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI*