Sequence detailsbmy_11894 (Coding sequence)

Part of scaffold_674 (SequenceType object (1))

For more information consult the page for scaffold_674 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPN21ENSTTRG00000012860 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, non-receptor type 21

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012204, Bottlenosed dolphin)

Protein Percentage 98.55%
cDNA percentage 98.15%
Ka/Ks Ratio 0.12724 (Ka = 0.007, Ks = 0.0549)

PTPN21ENSBTAG00000018596 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000024750, Cow)

Protein Percentage 89.0%
cDNA percentage 85.98%
Ka/Ks Ratio 0.09611 (Ka = 0.0589, Ks = 0.6127)

PTPN21 (Minke Whale)

Gene Details

protein tyrosine phosphatase, non-receptor type 21

External Links

Gene match (Identifier: BACU013151, Minke Whale)

Protein Percentage 96.11%
cDNA percentage 96.58%
Ka/Ks Ratio 0.36937 (Ka = 0.0255, Ks = 0.0692)

Additional orthologs identified in other species via the OPTIC pipeline.

PTPN21 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 3735 bp    Location:360135..423114   Strand:+
Raw sequence 
>bmy_11894
ATGCCACTGCCATTTGGATTGAAACTAAAACGCACCCGGCGCTACACGGTATCCAGCAAGAGCTGCCTGGTTGCCCGGATCCAGCTGCTTAACAATGAGTTTGTAGAGTTCACGCTGTCGGTGGAGAGCACTGGCCAGGAGAGCCTGGAGGCTGTGGCCCAGAGACTGGAGCTGCGGGAGCATCTTATTGTCCAGGATGATGCCAAATTTGAGCGTAGTGACAAGTGGATTAACACTAGTCAGAATTCAACTAGGTCAAACCCCAGTTATGCTTATTATAAAATATTAATTACGGTCACTTACTTCAGCCTCTGGTACTACAACAAGCAAAACCAGCGCCGGTGGGTAGATTTGGAAAAACCTCTAAAGAAGCAGCTGGATAAATATGCATTGGAACCTACCGTCTATTTTGGAGTGGTGTTTTATGTGCCTTCAGTTTCACAGCTGCAGCAGGAGATTACCAGGTATCAGTATTATCTGCAGCTGAAGAAAGATATCTTGGAAGGAAACATTCCTTGTACATTAGAACAAGCAATTCAGCTAGCAGGCTTAGCTGTTCAAGCTGATTTTGGTGACTTTGATCAGTATGAATCCCAGGATTTTCTTCAGAAATTTGCCTTGCTTCCTGTGTCTTCTGGTCCTTGTAAACCCACAGAAACAGAAGGGTCTGTGGTCATTGGACTGCAGCCAGAGAAATTCATTTTGTGTTCGGATGAGTGGTTACAAGATGAAAAAGTATTGGAGGAAGCAACCCAAAAAGTGGCCTTACTGCATCAGAAATACAGAGGGCTGACAGCTCCTGATGCTGAAATGCTGTACATGCAGGAGATAGAGAGAATGGACGGCTATGGAGAAGAGAGCTACCCTGCCAAGGATAGCCAAGGCAGCGACATATCCATCGGAGCGTGTCTCGAAGGTATCTTTGTGAAACATAAGAATGGAAGGCCTCCTGTGATATTTAGGTGGCATGATATTGCTAACATGTCCCACAATAAGTCCTTTTTTGCATTAGAGCTGTCAAATAAAGAGGAGACCATCCAGTTTCAGACTGAAGACATGGAAACAGCAAAATACGTGTGGAGACTCTGTGTTGCGCGACACAAGTTTTACAGACTGAATCAGTGCAGCCTGCAAACTCAGACCGTCATAGTGAACCCAATTAGGAGGAGGTCTTCTTCAAGGATGTCTCTGCCTAAACCCCAGCCCTATGTGATGCCTCCCCCACCCCAGCTGCATTATAATGGACATTATACAGAACCATACACTTCTTCCCAAGATAACCTGTTTGTGACCAACCAGAATGGATACTACTGTCACTCTCAGACAAGTTTGGATCGAGCCCAGATTGACCTGAGTGGTCGCCTCCGCAACGGCAGTGTCTACAGTGCACACAGCACCAGCTCCTTAAATAACCCCCAGCCCTACTTGCAGCCCTCACCCATGTCCTCGAACCCGAGCATCACCGGGAGTGACATCATGAGGCCTGACTACGTCCCGTCGCACCGGCACAGCGCCCTGATCCCCCCGTCCTACCGCCCGACCCCCGACTATGAGACGGTGATGAAGCAGCTCCACAGAGGCCTGGCGCCTGCCGAGAGGCAGAGCCGCTCGCTGAGAAACCTCAACATCGGCAGCTCGTACGCGTACAGCAGGCCCGATGCGCTGGTCTACAGCCAGCCCGAAATCCGGGAGCACGCGCACTTCAGCTCCCCCCCGTCGGCCCACTACCCGTTCAACCTGAATTACAGCTTCCACAGCCAGGCCCCTTACCCGTACCCCACAGAGAGGCGGCCGGTGGTGGGTGCCGTCAGCGTGCCCGAGCTGACCAACGTGCAGCTCCAGGCCCGGGACTACCCAGCCCCCAACATCATGAGGACGCAGGTGTACCGCCCGCCGCCCCCCTACCCGTACCCCAGGCCCGCCAACAGCACCCCTGACCTGTCCCGCCACCTCTACATCAGCAGCAGCAACCCCGATCTCATCACCCGGCGGGTCCATCACTCGGTCCAGACGTTCCAGGAGGACAGCTTGCCGGTGGCGCATTCCCTGCAGGAGGTCAGCGAGCCCCTGACCTCGGCCCGGCACGCCCAGCTCCAGAAGAGGAACAGCATTGAGATCGCCGGGCTGACCCACGGCTTTGAGGGCCTGCGGCTCAAGGAGAGGACCATGTCGGCGTCGGCAGCGGACGTGGCTCCGCGGGCTGTCTCCGCGGGCTCCCAGCCAAACGTCGTCACGGAAAGGACAAAGCGAGAAGAGGAGGACGAGCAGGAGAGCCTGAGATACGGTCACAAAAAGTCTCTTTCAGACGCCACCATGCTGATACACAGCAGCGAGGAGGAGGAGGAGGACTTGGAGGAGGAGCGCGGGGCGCGGGCGCAGCCCTCTCCCCGGGCGCGGGAGCCCCGGGGCAGCTACTCCCAGGAAGCCCCGCTGAGCGGCCCCCACACGCCCGGCCCCCCGGCCGCCGGCCCCTTGCACATCCTTGAGCCCAAGGCCCACGTCACTGAGGCCGAGAGGAAGGGGAGGGACGGCAGCCCCGTGCCCACGCCCGGGGAAGGCCCGCGGCCCAGGAGGGACGGGCTGCTGACGCCCTCCATGTCCGAGTCCGACCTCACCACGTCGGGGAGGTACCGCGCCAGGAGGGACYCTCTGAAGAAGAGGCCGGTGTCAGATCTCCTCTCCGGAAAGAAGAACGTCGTGGAAGGGCTTCCGCCGTTAGGGGGAATGAAAAAGAGCCGAGTAGATGCAAAAAAAATTGGTCCTCTCAAACTGGCTGCCCTAAATGGACTCTCCCTGTCTCGACTGCCTCTGCCTGATGAAGGAAAGGAGGTGCCTGCCAGAGCCACGAATGATGAGAGGTGTAAAATTCTGGAACAGCGGTTAGAACAAGGAATGGTATTCACAGAATATGAAAGAATTCTTAAAAAACGGCTAGTTGATGGGGAGTGCTCAACAGCACGACTCCCTGAAAATGCAGAAAGAAATCGGTTCCAAGATGTTCTTCCCTATGATGATGCCAGAGTGGAACTGGTCCCAACCAAAGAAAACAATACCGGTTACATCAACGCGTCACATATTAAGGTCTCTGTCAGTGGAATTGAATGGGATTATATTGCCACTCAGGGACCATTACAAAATACCTGTCAGGACTTTTGGCAGATGGTGTGGGAACAGGGAATTGCAATTATAGCAATGGTGACAGCAGAAGAGGAGGGTGGAAGGGAGAAGAGCTTTAGGTATTGGCCACGCCTTGGTTCCAGGCACAACACTGTCACCTATGGAAGGTTTAAGATCACCACCCGGTTCCGCACAGACTCTGGCTGCTATGCCACCACGGGCTTGAAGATGAAGCACCTTCTCACGGGACAGGAGAGGACGGTGTGGCATCTCCAGTACACAGACTGGCCTGAGCATGGCTGTCCAGAGGACCTCAAGGGATTTTTATCATACCTTGAAGAGATCCAGTCTGTTCGACGCCATACAAATAGTACAAGTGAACCAAAAAGCCCCAACCCTCCGTTACTGGTCCACTGCAGTGCCGGCGTGGGACGGACTGGCGTCGTTATTTTGTCAGAGATCATGATTGCCTGTCTGGAACACAACGAGGTGCTGGACATCCCACGGGTGCTGGACATGCTGAGGCAACAGAGAATGATGATGGTGCAGACCCTCTGCCAGTACACGTTCGTATACCGAGTTCTCATTCAGTTCCTGAAAAGCTCAAGACTCATATAA

Related Sequences

bmy_11894T0 SequenceType object (3)

Length: 1245 aa      View alignments
>bmy_11894T0
MPLPFGLKLKRTRRYTVSSKSCLVARIQLLNNEFVEFTLSVESTGQESLEAVAQRLELREHLIVQDDAKFERSDKWINTSQNSTRSNPSYAYYKILITVTYFSLWYYNKQNQRRWVDLEKPLKKQLDKYALEPTVYFGVVFYVPSVSQLQQEITRYQYYLQLKKDILEGNIPCTLEQAIQLAGLAVQADFGDFDQYESQDFLQKFALLPVSSGPCKPTETEGSVVIGLQPEKFILCSDEWLQDEKVLEEATQKVALLHQKYRGLTAPDAEMLYMQEIERMDGYGEESYPAKDSQGSDISIGACLEGIFVKHKNGRPPVIFRWHDIANMSHNKSFFALELSNKEETIQFQTEDMETAKYVWRLCVARHKFYRLNQCSLQTQTVIVNPIRRRSSSRMSLPKPQPYVMPPPPQLHYNGHYTEPYTSSQDNLFVTNQNGYYCHSQTSLDRAQIDLSGRLRNGSVYSAHSTSSLNNPQPYLQPSPMSSNPSITGSDIMRPDYVPSHRHSALIPPSYRPTPDYETVMKQLHRGLAPAERQSRSLRNLNIGSSYAYSRPDALVYSQPEIREHAHFSSPPSAHYPFNLNYSFHSQAPYPYPTERRPVVGAVSVPELTNVQLQARDYPAPNIMRTQVYRPPPPYPYPRPANSTPDLSRHLYISSSNPDLITRRVHHSVQTFQEDSLPVAHSLQEVSEPLTSARHAQLQKRNSIEIAGLTHGFEGLRLKERTMSASAADVAPRAVSAGSQPNVVTERTKREEEDEQESLRYGHKKSLSDATMLIHSSEEEEEDLEEERGARAQPSPRAREPRGSYSQEAPLSGPHTPGPPAAGPLHILEPKAHVTEAERKGRDGSPVPTPGEGPRPRRDGLLTPSMSESDLTTSGRYRARRDXLKKRPVSDLLSGKKNVVEGLPPLGGMKKSRVDAKKIGPLKLAALNGLSLSRLPLPDEGKEVPARATNDERCKILEQRLEQGMVFTEYERILKKRLVDGECSTARLPENAERNRFQDVLPYDDARVELVPTKENNTGYINASHIKVSVSGIEWDYIATQGPLQNTCQDFWQMVWEQGIAIIAMVTAEEEGGREKSFRYWPRLGSRHNTVTYGRFKITTRFRTDSGCYATTGLKMKHLLTGQERTVWHLQYTDWPEHGCPEDLKGFLSYLEEIQSVRRHTNSTSEPKSPNPPLLVHCSAGVGRTGVVILSEIMIACLEHNEVLDIPRVLDMLRQQRMMMVQTLCQYTFVYRVLIQFLKSSRLI*