Sequence detailsbmy_11900 (Coding sequence)

Part of scaffold_674 (SequenceType object (1))

For more information consult the page for scaffold_674 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GALCENSTTRG00000008096 (Bottlenosed dolphin)

Gene Details

galactosylceramidase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007675, Bottlenosed dolphin)

Protein Percentage 79.2%
cDNA percentage 79.72%
Ka/Ks Ratio 0.26731 (Ka = 0.0314, Ks = 0.1173)

GALCENSBTAG00000001124 (Cow)

Gene Details

galactocerebrosidase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001495, Cow)

Protein Percentage 85.17%
cDNA percentage 86.55%
Ka/Ks Ratio 0.30468 (Ka = 0.0984, Ks = 0.3229)

Additional orthologs identified in other species via the OPTIC pipeline.

GALC (Human)   Galc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1884 bp    Location:824915..867402   Strand:+
Raw sequence 
>bmy_11900
ATGATGGGCAAAACCAAGACAGGCAAACAGATAACCTGGGAAATGACTTTCCACAGCTCAGCGCTGCCCAAGAGCTGGCTAAATATGGGCATGCTAGATGGCATGCATAAGCACTCTGAAAAGGCAACCTCCCGACTTCTAGTAAATTACCCAGAGCCCTATCGTTCTCAAATACTGGATTATCTCTTTAAGCCAAACTTCGGTGCCTCTTTGCATATTCTAAAAGTTGAAATAGGTGGTGATGGGCAGACAACAGATGGCACCGAGCCTTCCCACATGCACTATGAATTAGACGAGAATTATTTCCGAGGATATGAGTGGTGGCTAATGAAGGAAGCTAAGAAACGGAACCCTAATRTCACACTCATGGGGCTGCCATGGTCATTCCCTGGATGGCTGGGGAAAGGTTTCAACTGGCCTTACGTAAATCTTCAGCTGACTGCCTACTATGTCGTGACCTGGATTGTGGGCGCCAAGCATTATCATGATCTGGACATTGATTATATCGGAATTTGGAATGAGAGGGCATTTGACATCAATTATATCAAGGTGTTAAGAAGAATGCTGAACTATCAAGGTCTCCAGCAAGTGAAAATCATAGCAAGTGATAATCTCTGGGAGCCCATTTCTGCTTCTATGCTGCTTGACTCTGAGCTCTTGAAGGTGATTGATGTTATAGGAGCTCATTACCCTGGGACCCGTACAGTAAAGGATGCTAGGTTGACTGAGAAGAAGCTTTGGTCTTCTGAAGATTTTAGCACTTTAAATAGTGATTTGCCGTATGGGCATTGTGGACTGATGACTGCTCAGGAGCCATGGAGCGGGCACTATGTAGTAGAAGCTCCTATCTGGATAACAGCTCATACCACTCAGTTTACTCAACCAGGTTGGTATTACCTGAAGACAGTTGGCCATTTAGAAAAAGGAGGAAGCTATGTAGCTCTGACGGATGGCTTAGGTAACCTCACCATCATCATTGAAACTATGAGTCATAAGCATTCCATGTGTATACGGCCACTTCTTCCCTATTTCAATGTTTCACAACAATTTGCTACCTTCATTCTTAAGGGTTCTTTTAGTGAAATACCAGAGCTGCAGGTGTGGTATACCAAACTTGGAAARCCATCAGAGAGATTTCTTTTCAAACAACTGGATTCTCTATGGCTCCTAGACAGCGGCGGCAGCTTCACGCTGGACCTGCAGGAGGACGGGCTGCTCACGCTCACCACGCTCAGCACCGGCAGCAAAGGCAGTTACCCGCTGCCTCCGAGGTCCCAGCCCTTTCCCTGCGTCTATAAGGATGACTTCAATGTCGATTACCCATTTTTTAGTGAAGCTCCGAATTTTGCTGATCAGACTGGTGTATTTGAATAYTTTATGAATATTGAAGACCCTGGAGAGCATCGCTTCACACTGCGCCAGGTTCTCAATCAAAGGCCCATTACTTGGGCTGCTGATGCATTCAACACCATCAGTATTATAGGAGATTACAAATGGTCCAATTTGACTGTAAAGTGTGATGTGTACATAGAGACCCCTGAGAAGGGAGGTGTGTTCATTGCTGGAAGAGTGAATAAAGGTGGTATTTTGATTAGAAGTGCCCGGGGAGTTTTCTTCTGGATATTTGCAAATGGAACCTACAGAGTTACAGGTGATCTAGCTGGATGGATCATATATACTTCAGGACATGCTGACGTTACAGCAAAAAAATGGTCTACACTCACTTTAACTATTAATGGTGGTTTCTCTTCTGGTACGCTGAATGGCAAGCCTCTCTGGAAAAACATCTCTGTGAACTTCCCGAAGAATGGCTGGGCCGCAGTTGGAACTCACTCCTTTGAATTTGCACAGTTTGACAACTTTCGTGTGGAAGCCATACACTAA

Related Sequences

bmy_11900T0 SequenceType object (3)

Length: 628 aa      View alignments
>bmy_11900T0
MMGKTKTGKQITWEMTFHSSALPKSWLNMGMLDGMHKHSEKATSRLLVNYPEPYRSQILDYLFKPNFGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKRNPNXTLMGLPWSFPGWLGKGFNWPYVNLQLTAYYVVTWIVGAKHYHDLDIDYIGIWNERAFDINYIKVLRRMLNYQGLQQVKIIASDNLWEPISASMLLDSELLKVIDVIGAHYPGTRTVKDARLTEKKLWSSEDFSTLNSDLPYGHCGLMTAQEPWSGHYVVEAPIWITAHTTQFTQPGWYYLKTVGHLEKGGSYVALTDGLGNLTIIIETMSHKHSMCIRPLLPYFNVSQQFATFILKGSFSEIPELQVWYTKLGKPSERFLFKQLDSLWLLDSGGSFTLDLQEDGLLTLTTLSTGSKGSYPLPPRSQPFPCVYKDDFNVDYPFFSEAPNFADQTGVFEYFMNIEDPGEHRFTLRQVLNQRPITWAADAFNTISIIGDYKWSNLTVKCDVYIETPEKGGVFIAGRVNKGGILIRSARGVFFWIFANGTYRVTGDLAGWIIYTSGHADVTAKKWSTLTLTINGGFSSGTLNGKPLWKNISVNFPKNGWAAVGTHSFEFAQFDNFRVEAIH*