Part of scaffold_663 (Scaffold)

For more information consult the page for scaffold_663 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA5 ENSTTRG00000009562 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009061, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.85%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0075)

PSMA5 ENSBTAG00000020641 (Cow)

Gene Details

Proteasome subunit alpha type-5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027507, Cow)

Protein Percentage 100.0%
cDNA percentage 97.69%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0969)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 651 bp    Location:46422..20798   Strand:-
>bmy_11905
ATGTTTCTCACCCGGTCTGAGTACGACAGGGGTGTGAATACTTTTTCTCCTGAAGGAAGATTATTTCAAGTGGAATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGCCATTGGGATCCAGACATCAGAGGGTGTGTGCCTAGCTGTGGAGAAGAGAATTACCTCTCCACTCATGGAGCCCAGCAGCATTGAGAAAATTGTAGAGATTGATGCTCACATAGGTTGTGCCATGAGTGGGCTAATTGCTGATGCTAAGACTTTAATTGATAAAGCCAGAGTGGAGACACAGAACCACTGGTTCACCTACAATGAGACCATGACAGTGGAGAGTGTGACTCAGGCTGTGTCAAATCTGGCTCTACAGTTTGGAGAAGAAGATGCAGATCCAGGTGCCATGTCTCGTCCCTTTGGAGTAGCACTGTTATTTGGAGGAGTTGATGAAAAAGGACCCCAGCTGTTTCATATGGACCCATCTGGCACCTTTTCTATGACACTGAAAGAAGCCATCAAATCTTCACTCATAATCCTCAAACAAGTAATGGAGGAGAAGCTGAATGCAACTAACATAGAGCTAGCCACAGTGCAGCCTGGCCAGAATTTCCACATGTTCACAAAGGAAGAACTTGAAGAGGTTATCAAGGACATTTAA

Related Sequences

bmy_11905T0 Protein

Length: 217 aa      View alignments
>bmy_11905T0
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI*