Part of scaffold_683 (Scaffold)

For more information consult the page for scaffold_683 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRNA9 ENSTTRG00000002840 (Bottlenosed dolphin)

Gene Details

cholinergic receptor, nicotinic, alpha 9 (neuronal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002663, Bottlenosed dolphin)

Protein Percentage 97.08%
cDNA percentage 97.84%
Ka/Ks Ratio 0.30183 (Ka = 0.0133, Ks = 0.0441)

BT.106486 ENSBTAG00000015252 (Cow)

Gene Details

neuronal acetylcholine receptor subunit alpha-9 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039441, Cow)

Protein Percentage 94.99%
cDNA percentage 93.32%
Ka/Ks Ratio 0.11393 (Ka = 0.024, Ks = 0.2109)

CHRNA9  (Minke Whale)

Gene Details

cholinergic receptor, nicotinic, alpha 9 (neuronal)

External Links

Gene match (Identifier: BACU018667, Minke Whale)

Protein Percentage 98.75%
cDNA percentage 98.68%
Ka/Ks Ratio 0.19505 (Ka = 0.0058, Ks = 0.0299)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location:430457..407655   Strand:-
>bmy_11941
ATGGTTTCCCTGTCCTTCCTGGGTCTCTCCCTGTCTCCTCTCATCCTGGTCAAGGAGAGAACTGGAAGACTGCACTGCCTGGCTGGGAATTTACAGAGGCTTAGGAAAAAGATGAACTGGCCCCACTTCTGCATCTCCTTTTGCTGGATTTACTTTGCTGCCTCCAGACTGAGAGCTGGAGAAACAGCAGATGGAAAATATGCTCAGAAGTTGTTTAATGACATTTTTGAAGATTATTCCAATGCTCTTCGTCCAGTAGAGGATACAGATAAAGTCCTGAATGTCACGCTCCAGATTACACTTTCTCAGATTAAGGATATGGATGAAAGAAATCAAATTCTGACTGCCTATTTGTGGATCCGCCAAATCTGGCACGATGCGTATCTCACATGGGATCGAGACCAGTATGATGGACTGGACTCCATCAGGATCCCCAGCGACCTGGTGTGGAGGCCGGATATTGTCCTGTATAACAAGGCTGATGATGAATCTTCTGAGCCTGTGAACACCAACGTGGTCCTGCGGTATGATGGGCTGATCACCTGGGATGCACCCGCCATCACCAAAAGCTCCTGTGTGGTGGATGTCACCTACTTCCCCTTTGATAATCAGCAGTGCAACCTGACCTTTGGTTCCTGGACCTACAATGGCAATCAGGTGGACATATTCAACGCCCTGGACAGCGGAGACCTCTCCGACTTCATCGAAGATGTGGAGTGGGAGGTGCATGGCATGCCTGCTGTGAAGAATGTGATCTCCTATGGCTGCTGCTCTGARCCTTACCCGGATGTGACATTCACTCTCCTTCTGAAGAGGCGGTCCTCTTTCTATATCGTCAACCTCCTCATCCCATGTGTCCTCATATCTTTTCTGGCTCCCTTGAGTTTTTATCTCCCAGCAGCCTCTGGGGAAAAGGTCTCCCTGGGAGTGACCATACTGTTGGCCATGACTGTATTTCAGCTCATGGTGGCAGARATCATGCCAGCCTCAGAAAATGTCCCTCTGATAGGCAAATACTACATAGCCACAATGGCCTTGATCACAGCCTCCACTGCCTTGACCATTATGGTGATGAATATCCACTTCTGCGGGGCTGAGGCCCGGCCAGTGCCACACTGGGCCAGGGTAGTCATCCTGAAATACATGTCTAGGATCTTGTTTGTTTACGATGTGGGTGAGAGCTGCCTTAGCCCCCGCCAAGACAGGGAGCAGGACCACCTCACGAAGGTTTACGGCAACCTTCCAGAGGCTAATCTGAAGACGACCAGAAATAAAGACCTTCCCAGAAAGAAGGAAATGAACAAACTCTTAAAGGATGACTTGAGGCACCAGGGTGAAAACCTGCAGGATGTTGACAGTGACTGTGCACGGTACAAAGTGCTGACGAGGAATATCGAATACATTGCCAAATGCCTCAAAGACCATAAGGCCACCAATACCAAGGGCAGCGAATGGAAAAAGGTTGCAAAAGTCATAGACCGATTCTTCATGTGGATTTTTTTTATTATGGTGTTTGTGATGACTGTTTTGATCATAGCCAGAGCAGATTAG

Related Sequences

bmy_11941T0 Protein

Length: 517 aa      View alignments
>bmy_11941T0
MVSLSFLGLSLSPLILVKERTGRLHCLAGNLQRLRKKMNWPHFCISFCWIYFAASRLRAGETADGKYAQKLFNDIFEDYSNALRPVEDTDKVLNVTLQITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVLYNKADDESSEPVNTNVVLRYDGLITWDAPAITKSSCVVDVTYFPFDNQQCNLTFGSWTYNGNQVDIFNALDSGDLSDFIEDVEWEVHGMPAVKNVISYGCCSEPYPDVTFTLLLKRRSSFYIVNLLIPCVLISFLAPLSFYLPAASGEKVSLGVTILLAMTVFQLMVAEIMPASENVPLIGKYYIATMALITASTALTIMVMNIHFCGAEARPVPHWARVVILKYMSRILFVYDVGESCLSPRQDREQDHLTKVYGNLPEANLKTTRNKDLPRKKEMNKLLKDDLRHQGENLQDVDSDCARYKVLTRNIEYIAKCLKDHKATNTKGSEWKKVAKVIDRFFMWIFFIMVFVMTVLIIARAD*