Part of scaffold_683 (Scaffold)

For more information consult the page for scaffold_683 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDS5A ENSTTRG00000012155 (Bottlenosed dolphin)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011538, Bottlenosed dolphin)

Protein Percentage 90.01%
cDNA percentage 90.19%
Ka/Ks Ratio 0.53074 (Ka = 0.0134, Ks = 0.0252)

PDS5A ENSBTAG00000017809 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023680, Cow)

Protein Percentage 94.28%
cDNA percentage 93.08%
Ka/Ks Ratio 0.19101 (Ka = 0.0398, Ks = 0.2083)

PDS5A  (Minke Whale)

Gene Details

PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)

External Links

Gene match (Identifier: BACU007637, Minke Whale)

Protein Percentage 98.68%
cDNA percentage 98.63%
Ka/Ks Ratio 0.42427 (Ka = 0.0107, Ks = 0.0252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4050 bp    Location:758240..840567   Strand:+
>bmy_11947
ATGGTTGAAACAGCTGTTCTGGAAAATCTCCCAAACAAGTCTTGTTTGATGGTAGTCAAAACTTTTATGGATATGGATCAGGATTCAGAAGATGAAAAACAGCAGTATCTCCCACTAGCCTTGCATCTAGCATCTGAATTTTTTCTCAGGAATCCCAATAAAGATGTGCGTCTCCTTGTAGCATGCTGTTTGGCTGACATCTTTAGAATCTATGCCCCAGAAGCTCCATATACTTCCCACGATAAACTTAAGGACATATTTTTGTTTATTACCAGACAATTAAAGGGTTTGGAGGATACAAAGAGCCCGCAGTTTAATAGATACTTTTATTTATTAGAGAATTTAGCTTGGGTTAAATCATATAACATCTGCTTTGAATTGGAAGATTGCAATGAAATTTTTATTCAGCTTTTTAGGACTCTCTTCTCAGTGATCAACAATAGCCACAATAAGAAGGTACAAATGCACATGCTAGACTTGATGAGTTCTATCATCATGGAAGGTGATGGAGTTACTCAAGAATTATTGGACTCCATTCTTATTAACCTCATTCCTGCACATAAGAACTTAAATAAACAGTCCTTTGACCTTGCAAAAGTCCTATTGAAAAGGACAGTCCAGACTATTGAGGCATGCATTGCCAATTTTTTCAATCAAGTCCTGGTGCTGGGAAGATCATCAGTAAGTGATTTGTCAGAACATGTATTTGATCTGATTCAGGAACTTTTTGCTATAGATCCTCATTTATTATTATCTGTCATGCCGCAGCTTGAATTCAAACTGAAGAGCAATGATGGAGAAGAGCGATTAGCTGTTGTTCGACTTTTAGCTAAATTGTTTGGTTCTAAAGATTCCGATTTGGCAACACAGAATCGTCCTCTGTGGCAGTGTTTTCTTGGACGATTCAATGACATTCACGTTCCTGTGAGATTAGAAAGTGTGAAATTTGCGAGTCACTGTTTAATGAATCACCCAGATTTAGCAAAGGATCTCACAGAATACTTGAAAGTTAGATCACATGATCCAGAAGAAGCTATTCGTCATGATGTCATTGTTACTATAATAACAGCTGCCAAAAGAGACCTTGCCTTAGTAAATGATCAGCTACTTGGCTTTGTAAGAGAAAGAACACTGGACAAACGGTGGCGAGTAAGAAAAGAAGCTATGATGGGTCTGGCTCAGCTTTATAAGAAATACTGTCTTCATGGTGAAGCAGGAAAGGAAGCTGCAGAGAAAGTCAGCTGGATAAAGGACAAACTTTTGCATATATATTACCAGAATAGCATCGATGACAAACTGTTGGTAGAGAAAATCTTTGCTCAGTATCTTGTCCCCCACAACCTGGAAACAGAAGAGAGAATGAAATGCTTGTATTATTTATATGCTAGTTTGGATCCAAATGCTGTCAAAGCTCTCAATGAAATGTGGAAGTGTCAGAACATGCTTAGAAGTCATGTACGAGAACTATTGGATTTGCACAAGCAGCCTACGTCTGAGGCTAACTGTTCTGCCATGTTTGGAAAACTGATGACCATAGCAAAGAATTTGCCTGACCCTGGGAAAGCACAAGATTTTGTGAAGAAATTTAACCAAGTCCTCGGTGATGATGAAAAACTGCGGTCTCAGTTGGAGTTGTTAATCAGTCCAACCTGTTCGTGCAAACAGGCAGATGTTTGTGTGAGAGAAATAGCCCGGAAACTTGCAAATCCTAAGCAGCCAACCAATCCTTTTCTAGAAATGGTCAAATTTCTGTTGGAAAGAATTGCACCTGTGCACATTGATTCAGAAGCCATCAGTGCACTGGTAAAACTAATGAATAAATCAATAGAGGGGACAGCAGATGATGAAGAGGAGGGTGTAAGTCCAGATACAGCTATTCGTTCAGGACTTGAACTTCTTAAGGTTCTGTCTTTCACACATCCTACCTCGTTCCACTCTGCAGAGACATATGAGTCCCTGTTACAGTGCCTCAGAATGGAAGATGACAAGGTAGCAGAAGCTGCTATACAAATTTTTAGAAATACAGGCCACAAAATAGAAACAGACCTACCCCAGATACGATCGACCTTAATTCCCATCTTACATCAGAAAGCAAAGAGAGGTACTCCCCACCAAGCAAAACAGGCCGTTCACTGTATACATGCCATATTCACAAATAAAGAAGTACAGCTTGCACAGATTTTTGAGCCACTCAGTAGGAGTCTCAATGCTGATGTACCAGAACAACTTATAACTCCATTAGTTTCATTGGGCCACATATCTATGTTAGCACCAGATCAATTTGCTTCCCCAATGAAATCTGTAGTAGCAAATTTTATTGTGAAAGATCTGCTAATGAATGACAGGTCAACAGGTGAGAAGAATGGGAAATTATGGTCTCCAGATGAAGAGGTTTCCCCTGAAGTACTAGCAAAGGTACAGGCAATTAAACTTCTGGTAAGGTGGCTGTTGGGTATGAAAAACAACCAGTCTAAATCTGCCAATTCAACTCTTCGGTTATTATCAGCGATGTTGGTTAGTGAGGGTGACCTGACAGAGCAAAAAAAGATCAGTAAATCTGATATGTCTCGCTTGCGATTAGCTGCTGGTAGTGCCATAATGAAGCTTGCTCAGGAACCTTGTTACCATGAAATTATAACCCCAGAACAGTTTCAGCTCTGTGCGCTTGTTATTAATGATGAGTGCTATCAAGTAAGGCAGATATTTGCTCAGAAGCTACATAAGGCACTTGTGAAGTTACTCCTCCCATTGGAGTATATGGCGATCTTTGCCTTGTGTGCCAAAGATCCTGTGAAGGAGAGAAGAGCACATGCACGACAGTGTTTACTAAAAAACATCAGTATACGCAGGGAGTACATTAAACAGAACCCCATGGCTACTGAGAAATTATTATCACTGTTGCCTGAGTATGTAGTTCCATATATGATTCACCTGCTAGCCCATGATCCAGATTTTACAAGATCACAAGATGTTGATCAACTTCGTGATATTAAAGAGTGCCTGTGGTTCATGCTTGAAGTTTTAATGACAAAGAATGAAAATAACAGCCATGCCTTTATGAAAAAGATGGCAGAGAACATCAAGCTAACAAAAGATGCCCAGTCTCCAGATGAATCCAAGACAAATGAAAAACTTTATACAGTGTGTGATGTGGCCCTGTGTGTTATAAATAGTAAAAGTGCTTTGTGCAATGCAGATTCACCAAAGGATCCGGTCCTTCCAATGAAATTTTTTACACAACCTGAAAAGGACTTCTGTAATGACAAGAGTTATATTTCAGAAGAGACAAGAGTACTTCTGTTAACAGGAAAGCCAAAACCTGCTGGAGTACTAGGTGCGGTAAACAAGCCTTTATCAGCAACGGGAAGGAAACCATATGTTAGAAGCACTGGAGCTGAGACTGGAAGCAATATTAATAGTTCAGAGGCAGCAGAAACTGGAGTTAGTGAAAATGAAGAGAACCCTGTGAGAATTATTTCTGTGACACCTGTAAAGAATATTGACCCAGTAAAGAATAAGGAGATTAATTCTGATCAGGCTGCCCAGGGCAACATCAGCAGTGACCGAGGAAAGAAAAGAACAGTAACAGCAGCTGGTGCAGAGAATATCCAACAAAAAGCAGATGAGAAAGTAGATGAATCAGGACCACCTGCCCCTTCAAAACCCAGGAGAGGACGTCGACCCAAGTCTGAATCTCAGGGCAATGCAACCAGAAATGATGATATAAATAAACCTCTTAGCAAGGGAAGAAAGAGAGCCGCAGTCAATCAGGAAAGCCCTGGAGGTTTGGAAGCAGGTAATGCCAAAGCACCCAAACTGCAAGACATAGCCAAAAAGGCAGCACCAGCAGAGAGACAAATTGACTTACAAAGAGTGAAAAGACACCTTAGAAGTCTTAAGTATGTCAGTAAAAAGAAAATTCATTTGCAAAGGGAGAAAATGAAGGTCAAACAGAAGCAGGCTCTAGCTTCTGCAAAAACTTGGATTCAAAATGACCCTGAACAGAAAATGAAGTTAACTTCAAAACACACTTTCTGCCTTGAAAACTGA

Related Sequences

bmy_11947T0 Protein

Length: 1350 aa      View alignments
>bmy_11947T0
MVETAVLENLPNKSCLMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNKKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTKDAQSPDESKTNEKLYTVCDVALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPAGVLGAVNKPLSATGRKPYVRSTGAETGSNINSSEAAETGVSENEENPVRIISVTPVKNIDPVKNKEINSDQAAQGNISSDRGKKRTVTAAGAENIQQKADEKVDESGPPAPSKPRRGRRPKSESQGNATRNDDINKPLSKGRKRAAVNQESPGGLEAGNAKAPKLQDIAKKAAPAERQIDLQRVKRHLRSLKYVSKKKIHLQREKMKVKQKQALASAKTWIQNDPEQKMKLTSKHTFCLEN*