Part of scaffold_677 (Scaffold)

For more information consult the page for scaffold_677 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GPT2 ENSTTRG00000000873 (Bottlenosed dolphin)

Gene Details

glutamic pyruvate transaminase (alanine aminotransferase) 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000824, Bottlenosed dolphin)

Protein Percentage 96.94%
cDNA percentage 96.68%
Ka/Ks Ratio 0.18753 (Ka = 0.0139, Ks = 0.0743)

GPT2 ENSBTAG00000002980 (Cow)

Gene Details

alanine aminotransferase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003881, Cow)

Protein Percentage 90.87%
cDNA percentage 90.87%
Ka/Ks Ratio 0.20548 (Ka = 0.0582, Ks = 0.2835)

GPT2  (Minke Whale)

Gene Details

glutamic pyruvate transaminase (alanine aminotransferase) 2

External Links

Gene match (Identifier: BACU001894, Minke Whale)

Protein Percentage 90.65%
cDNA percentage 92.5%
Ka/Ks Ratio 0.46639 (Ka = 0.0527, Ks = 0.113)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1542 bp    Location:52072..107995   Strand:+
>bmy_11962
ATGCAGCGGGCGGCGGCGCTGGTCCGGCGGGGCTGCTACCCCCGGACCCTCGGCCCCTGGGGCCGCGGTCAGAGCAGCGCGGCCGCCGAGGCCTCGGCGGTGCTCAAGGTGCGGTCCGAGCGGAGCCGGCGCGACCGCATCCTTACTCTCGAGTCCATGAACCCGCAGGTGAAGGCGGTGGAGTATGCGGTGCGGGGACCCATCATGCTCAAGGCCGGCGAGATCGAGCTCGAGCTGCAGAGGGGTATCAAAAAACCATTCACTGAGGTCATCCGTGCCAACATCGGGGATGCCCAAGCCATGGGCCAGCAGCCAATCACCTTCCTCCGACAGGTGATGGCACTCTGTACCTACCCAAACCTGTTGGACAGCCCCAGCTTCCCAGAAGATGCTAAGAAACGAGCCCGGCGGATCCTACAGGCTTGTGGCGGGAACAGCCTGGGATCTTACAGCGCTAGCCAGGGCGTCAACTGCATCCGTGAAGATGTGGCTGCCTATATCACCAGGAGAGATGGTGGTGTACCTGCAGACCCGGATAACATTTACCTGACCACTGGAGCTAGTGACGGCATTTCCACGATCCTGAAGATCCTGGTCTCCGGGGGTGGCAAGTCACGGACGGGTGTGATGATCCCCATCCCGCAGTACCCCCTCTACTCGGCGGTCATCTCTGAACTCGATGCCATCCAGGTGAACTATTACCTGGATGAGGACAACTGCTGGGCCCTGAACGTGAATGAGCTCCGGCGGGCCGTGCGGGAGGCCAAAGAGCACTGTGACCCCAAGGTGCTGTGCATCATCAACCCCGGGAACCCCACAGGTCTGTGCTTTACTCCCTGGCCAGTGTACCAGGACAACGTGTACTCTCCAGACTGCAGATTTCACTCCTTTAAGAAGGTGCTTTACGAGATGGGGCCCGAGTACTCCAGCAACGTGGAGCTCGCCTCCTTCCACTCCACCTCCAAGGGCTACATGGGCGAGTGTGGCTACAGAGGAGGCTACATGGAGGTGATCAACCTGCACCCTGAGATCAAGGGCCAGCTGGTAAAGCTGCTCTCGGTGCGTCTGTGCCCACCAGTGTCTGGGCAGGCTGCCATGGACATCGTTGTGAACCCCCCGGTGCCAGGAGAGGAATCCTTCGAGCAGTTCAGCAGGGAGAAAGAGTCCGTCTTGGGTAATCTGGCCAAAAAAGCTAAGCTGACAGAAGACCTGTTTAACCAAGTCCCAGGAATTCACTGCAACCCCTTGCAGGGGGCCATGTACGCCTTTCCTCGAATCTTCATCCCTGCCAAAGCCATGGAGGCAGCTCAGGCCCATAAGATGGCCCCCGACATGTTCTACTGCATGAAGCTCCTGGAGGAGATGGGCATCTGTGTCGTGCCCGGCAGCGGCTTTGGGCAGAGGGAAGGCACCTACCACTTCAGACAGACCCCTGGACCCTTGATTGTCCATGGATCAAGACTCTTGGACTTTCAACAATACAATGTATTATGTATTATGGGCTCTTCCTCCTCCAGATGTGCCTCACTGCTTCTTAAGACT

Related Sequences

bmy_11962T0 Protein

Length: 514 aa      View alignments
>bmy_11962T0
MQRAAALVRRGCYPRTLGPWGRGQSSAAAEASAVLKVRSERSRRDRILTLESMNPQVKAVEYAVRGPIMLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEDNCWALNVNELRRAVREAKEHCDPKVLCIINPGNPTGLCFTPWPVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVPGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAMEAAQAHKMAPDMFYCMKLLEEMGICVVPGSGFGQREGTYHFRQTPGPLIVHGSRLLDFQQYNVLCIMGSSSSRCASLLLKT