Sequence detailsbmy_11972 (Coding sequence)

Part of scaffold_667 (SequenceType object (1))

For more information consult the page for scaffold_667 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARID3BENSTTRG00000007975 (Bottlenosed dolphin)

Gene Details

AT rich interactive domain 3B (BRIGHT-like)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007547, Bottlenosed dolphin)

Protein Percentage 92.5%
cDNA percentage 92.69%
Ka/Ks Ratio 0.34245 (Ka = 0.0572, Ks = 0.1672)

ARID3BENSBTAG00000011828 (Cow)

Gene Details

AT-rich interactive domain-containing protein 3B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000015698, Cow)

Protein Percentage 88.24%
cDNA percentage 88.33%
Ka/Ks Ratio 0.22771 (Ka = 0.079, Ks = 0.3469)

ARID3B (Minke Whale)

Gene Details

AT rich interactive domain 3B (BRIGHT-like)

External Links

Gene match (Identifier: BACU017913, Minke Whale)

Protein Percentage 92.78%
cDNA percentage 93.52%
Ka/Ks Ratio 0.46731 (Ka = 0.0564, Ks = 0.1207)

Additional orthologs identified in other species via the OPTIC pipeline.

ARID3B (Human)   Arid3b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1083 bp    Location:96059..87341   Strand:-
Raw sequence 
>bmy_11972
ATGAACGTATTTCCAACTCAGCAAAAGGTGGGCATCCACAGATGTCTTCTTTCTCTGCATGGTAATGACACAACCCTCTGTTTCTCTCTTCGCACAATCACAGGGACCCCCATCAACCGAATCCCCATCATGGCCAAGCAGATCCTGGACCTATATATGCTGTATAAGCTGGTGACAGAGAAGGGGGGCCTGGTGGAGATCATCAACAAGAAGATCTGGAGGGAGATCACCAAAGGCCTGAACCTGCCCACATCCATCACCAGCGCCGCCTTCACCCTGAGGACCCAGTATATGAAGTATCTCTATGCCTACGAGTGCGAGAAGAAAGCCTTGAGCTCCCCGGCCGAGCTCCAGGCAGCCATTGACGGCAACCGGAGGGAGGGCCGCCGGCCCAGCTACAGCTCCTCCCTCTTTGGCTACTCGCCCGCTGCTGCCTCTGCCGCTGGGGCCCCTGCCCTCCTCTCCCCACCCAAGATCCGCTTCCCCATCCTCGGGCTGGGCTCTGGCAGTGGCACCAATGCCAGTGGCCCTCGGATATCCCCAGCAACCACTCTCAGGAAAGGTGATGGAGTCCCAGTGACAACCGTGCCCGTGCCAAATCGCCTGGCTGTGCCCGTGACCTTGGCCAGCCAGCAGGCCGGTACCCGGACGGCCACGCTGGAGCAGCTGCGGGAGCGGCTGGAGTCGGGGGAGCCCCCTGAGAAGAAGGCGTCCAGGCTGTCAGAGGAGGAGCAGCGCCTTGTGCAGCAGGCCTTCCAGCGCAACTTCTTCAGCATGGCGCGGCAGCTGCCCATGAAGATCAGGATCAACGGCAGGGCAGAGGACAGAGCAGAGGCCTCGGCTGCAGCACTGAACCTGACCACGAGCAGCATTGGGAGCATCAACATGTCTGTGGACATCGACGGCACCACTTATGCAGGTGTGCTGTTTGCCCAGAAACCTGTGGTCCACCTCATCGCAGGATCCGCTCCCCAGAGCATCGGCAGCAGCGCCAGCAGCAGCAGCAGTTCTCACTGCTCGCCAAGTCCTACCTCGTCCAGGGGCACCCCCAGTGCAGAGCCCTCCACCAGCTGGTCCCTCTGA

Related Sequences

bmy_11972T0 SequenceType object (3)

Length: 361 aa      View alignments
>bmy_11972T0
MNVFPTQQKVGIHRCLLSLHGNDTTLCFSLRTITGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITKGLNLPTSITSAAFTLRTQYMKYLYAYECEKKALSSPAELQAAIDGNRREGRRPSYSSSLFGYSPAAASAAGAPALLSPPKIRFPILGLGSGSGTNASGPRISPATTLRKGDGVPVTTVPVPNRLAVPVTLASQQAGTRTATLEQLRERLESGEPPEKKASRLSEEEQRLVQQAFQRNFFSMARQLPMKIRINGRAEDRAEASAAALNLTTSSIGSINMSVDIDGTTYAGVLFAQKPVVHLIAGSAPQSIGSSASSSSSSHCSPSPTSSRGTPSAEPSTSWSL*