Sequence details bmy_11982 (Coding sequence)

Part of scaffold_667 (Scaffold)

For more information consult the page for scaffold_667 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LOXL1 ENSTTRG00000000059 (Bottlenosed dolphin)

Gene Details

lysyl oxidase-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000054, Bottlenosed dolphin)

Protein Percentage 97.93%
cDNA percentage 98.1%
Ka/Ks Ratio 0.10778 (Ka = 0.0084, Ks = 0.0779)

LOXL1 ENSBTAG00000009086 (Cow)

Gene Details

lysyl oxidase homolog 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011978, Cow)

Protein Percentage 94.99%
cDNA percentage 94.19%
Ka/Ks Ratio 0.06198 (Ka = 0.0213, Ks = 0.3429)

LOXL1  (Minke Whale)

Gene Details

lysyl oxidase-like 1

External Links

Gene match (Identifier: BACU017926, Minke Whale)

Protein Percentage 98.26%
cDNA percentage 98.39%
Ka/Ks Ratio 0.16039 (Ka = 0.0087, Ks = 0.0542)

Additional orthologs identified in other species via the OPTIC pipeline.

LOXL1 (Human)   Loxl1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1803 bp    Location:608637..585558   Strand:-
Raw sequence 
>bmy_11982
ATGGCTCTGGCCCCAGCCGGTTGGCAGCTGGGGGCCCTGGTGTGGGGCGCCTGCGTCTGCGTCCTGGTGCACGGGCAGCAGACGCATCCAGGGCAGGGCTCGGACCAGGGACGCTGGCGGCAGCTGATCCAGTGGGAGAACAACGGGCAGGTGTACAGCCTGCTCAACTCGGGCTCAGAGTACTTGCCTGCTGGGACTCAGCCCTCCGAGGGTAACTCCCGGGTGCTGCTGGCGGGCGCCCCCCAGGCCCCGCATCGGCGCAGCCACGGGGGCCTCCGGCGTCGCCAGGCCCCGTCGCTGCCCCTGCCCGGGCGCATCGGCTCGGACACCGTGCGCGGCCAAGCGCGGCACCCATTTGGCTTCGGCCAGGTGCCCGACAACTGGCGCGAGGTGGCCGTCGGGGATAGCACAGCCATGGCCCGGGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTCCGCCTCCTCGGCCTCGGCCTCGGCCTTCGCCACCACCTACCGCCAGCCGTCCTCCTTTCCGCAGCAGTTCCCCTATCCGCAGGCGCCCTTCGTCAGCCAGTACGAGACGTACGACCCCGCGTCGCGGACCTACGACCAGGGCTACGTGTACTACCGCAGCGTGGGCGGCGGCCTGGGCGCAGGGACTGCGGCCGTGGCCTCGGCGGGGGTCATCTACCCCTTCCAGCCCCGGGCGCGCTACGAGGAGTACGGCGGCGGCGAGGAGCAGCCCGAGTACCCGCCGCAGGGCTTCTATCCGGCCCCGGAGAGGCCGTACGCGCCGCAGCCGCAGCAGCCGCCGCAGCCGCAGCCAGCCGACGGCCTGGACCGCCGCTACTCGCACAGCCTGTACAACGAGGGCACCGCGGGCCTCGAGCAGGCCGGCACCGCGGGCCTCGAGCAGGCCTACCCCGACCCGGGCCCCGACGCCGCGCAGCCCAACGGTGGCGCCTACGGCGGCGACCCCCGCCTCGGCTGGTACCCGCCCTACGGCAACATGCCACCCGAGGCCTACAGCCCGCCGCGGGCCGTGGAGCCGCAGCCCCCCTTCCGCGTGCTGGAGCCTCCCTACCTGCCGGTGCGCAGCTCCGACGCGCCCCCGCCGGCTTTGGAGCGCAATGGCGCGCAGCAGGGCCGCCTGAGTGTGGGCAGCGTGTACCGGCCCAGCCAAAACGGTAGAGGTCTCCCTGACTTGGTCCCGGACCCCAACTACGTGCAAGCGTCCACTTACGTCCAGAGAGCCCATCTGTACTCCCTGCGCTGTGCTGCAGAGGAGAAGTGTCTGGCCAGCACAGCCTACGCCCCTGAGGCCACCGACTACGACGTGCGGGTGCTGCTGCGTTTCCCCCAGCGCGTGAAGAACCAGGGCACCGCAGACTTCCTTCCGAACCGGCCGCGGCACACCTGGGAGTGGCACAGCTGCCACCAGCACTACCACAGCATGGACGAGTTCAGCCACTACGACCTGCTGGATGCAGTCACAGGCAAGAAGGTAGCCGAGGGCCACAAGGCCAGCTTCTGCCTGGAGGACAGCACCTGCGACTTCGGCAACCTCAAGCGCTACGCGTGCACCTCTCACACACAGGGCCTGAGCCCAGGCTGCTATGACACGTACAATGCAGACATCGACTGCCAGTGGATTGACATAACCGATGTGCAGCCYGGGAACTACATCCTCAAGGTGCACGTGAACCCAAAGTACATTGTTTTGGAGTCTGACTTCACGAACAATGTGGTGAGATGCAACATCCACTATACAGGTCGCTATGTTTCTACAACAAACTGCAAAATTGTCCAATCCTGA

Related Sequences

bmy_11982T0 Protein

Length: 601 aa      View alignments
>bmy_11982T0
MALAPAGWQLGALVWGACVCVLVHGQQTHPGQGSDQGRWRQLIQWENNGQVYSLLNSGSEYLPAGTQPSEGNSRVLLAGAPQAPHRRSHGGLRRRQAPSLPLPGRIGSDTVRGQARHPFGFGQVPDNWREVAVGDSTAMARARTSVSQQRHGGSASSASASAFATTYRQPSSFPQQFPYPQAPFVSQYETYDPASRTYDQGYVYYRSVGGGLGAGTAAVASAGVIYPFQPRARYEEYGGGEEQPEYPPQGFYPAPERPYAPQPQQPPQPQPADGLDRRYSHSLYNEGTAGLEQAGTAGLEQAYPDPGPDAAQPNGGAYGGDPRLGWYPPYGNMPPEAYSPPRAVEPQPPFRVLEPPYLPVRSSDAPPPALERNGAQQGRLSVGSVYRPSQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAVTGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSTTNCKIVQS*