Sequence detailsbmy_11983 (Coding sequence)

Part of scaffold_667 (SequenceType object (1))

For more information consult the page for scaffold_667 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBC1D21ENSTTRG00000000058 (Bottlenosed dolphin)

Gene Details

TBC1 domain family, member 21

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000053, Bottlenosed dolphin)

Protein Percentage 94.41%
cDNA percentage 95.03%
Ka/Ks Ratio 0.3064 (Ka = 0.0356, Ks = 0.1163)

BT.17207ENSBTAG00000007800 (Cow)

Gene Details

TBC1 domain family member 21

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000044529, Cow)

Protein Percentage 89.04%
cDNA percentage 88.7%
Ka/Ks Ratio 0.1552 (Ka = 0.0666, Ks = 0.4291)

TBC1D21 (Minke Whale)

Gene Details

TBC1 domain family, member 21

External Links

Gene match (Identifier: BACU017927, Minke Whale)

Protein Percentage 93.72%
cDNA percentage 94.94%
Ka/Ks Ratio 0.36467 (Ka = 0.0393, Ks = 0.1078)

Additional orthologs identified in other species via the OPTIC pipeline.

TBC1D21 (Human)   Tbc1d21 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1155 bp    Location:650111..639406   Strand:-
Raw sequence 
>bmy_11983
ATGGCCAAGCTTTCCCCAGGTATACCTTTTGTTAACAGCGTGAAGAGAAAACCACCCATTGACAAGACGGAATGGGATGGCTTCTTTGACGAGAACGGTCACTTGGCCAAGTCACGAGACTTCATTTGTGTTAACATCCTGGAAAGGGGTCTGCACCCCTTCGTGAGGACGGAAGCCTGGAAATTCCTTACRGGCTACTACTCATGGCAGAGTTCCCAGGATGAGCGGCTCATGGTGGACAGCACAAGGAGGAAGAACTATGAGGCCTTATGCCAGATGTACGAGAAGATTCAGCCCCTCCTGGAAAACCTGCACCGGAACTTCATAGAGACTCGGAATAACATCGCATACGACATCCAGAAACTCTATGACAAAGACCCCCTGGGCAATGTCCTTATTGATAAGAAGAGGCTGGAGAAGATCCTGCTCCTGAGTTACGTCTGCAACACCCAGGCAGAGTACCAGCAGGGCTTCCATGAGATGGTGATGCTTTTCCAGCTGATGGTGGAACATGACCATGAGACCTTCTGGCTTTTCCAGTTCTTCCTACAGAAAACGGAGCACAGCTGTGTCATCAGCATTGGGGTGGGCAAGAACCTCGACATGCTCAACAACCTGATCAACTTCCTGGACCCCGTGTTTGCTGAGCACTTAAAAGGGAAGGGTGCGGGGGCCGTGCAGTCCCTCTTCCCCTGGTTCTGCCTCTACTTTCAACGTGCCTTCAAGTCCTTCGACGACGTCTGGAGGCTCTGGGAGGTCCTGCTGACGGGGAAGCCCTGCAGGAACTTCCAGGTGCTGGTGGCCTACAGCATGCTGCAGATGGTACGCGAGCAGGTGCTGCAGGAGAGCATGACAGGTGACGACATCCTCCTGGCGTGCAACAACCTCATAGACCTTGATGCTGCTGAGCTGGTCTCYGCTGCCTGCACAGTCTACGCGGAGCTCGTCCAAAAGGACGTAAGTTACCCCGATTACTTGTCCTCCTTCCCTTCCTCCTCCAAGAAGCCCTCCCCAGTCTCCCAAGCCCAGCCCTTGGCAGGCGTATTCAACTTCAGGGACACAGCTTGTGCTACGTTCTCTGCCACCAACCCACGGGGTTTGCTCTGCATGGACTTCTCACAGGTTTGCCTGTGTAACTCCTGCCTCCCCAAGTAG

Related Sequences

bmy_11983T0 SequenceType object (3)

Length: 385 aa      View alignments
>bmy_11983T0
MAKLSPGIPFVNSVKRKPPIDKTEWDGFFDENGHLAKSRDFICVNILERGLHPFVRTEAWKFLTGYYSWQSSQDERLMVDSTRRKNYEALCQMYEKIQPLLENLHRNFIETRNNIAYDIQKLYDKDPLGNVLIDKKRLEKILLLSYVCNTQAEYQQGFHEMVMLFQLMVEHDHETFWLFQFFLQKTEHSCVISIGVGKNLDMLNNLINFLDPVFAEHLKGKGAGAVQSLFPWFCLYFQRAFKSFDDVWRLWEVLLTGKPCRNFQVLVAYSMLQMVREQVLQESMTGDDILLACNNLIDLDAAELVSAACTVYAELVQKDVSYPDYLSSFPSSSKKPSPVSQAQPLAGVFNFRDTACATFSATNPRGLLCMDFSQVCLCNSCLPK*