Part of scaffold_687 (Scaffold)

For more information consult the page for scaffold_687 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VCPIP1 ENSTTRG00000017144 (Bottlenosed dolphin)

Gene Details

valosin containing protein (p97)/p47 complex interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016249, Bottlenosed dolphin)

Protein Percentage 94.67%
cDNA percentage 94.21%
Ka/Ks Ratio 0.10754 (Ka = 0.0041, Ks = 0.0381)

VCPIP1 ENSBTAG00000006695 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008802, Cow)

Protein Percentage 96.4%
cDNA percentage 94.16%
Ka/Ks Ratio 0.11558 (Ka = 0.0216, Ks = 0.1871)

VCPIP1  (Minke Whale)

Gene Details

valosin containing protein (p97)/p47 complex interacting protein 1

External Links

Gene match (Identifier: BACU011117, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.48%
Ka/Ks Ratio 0.11619 (Ka = 0.0017, Ks = 0.0144)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3675 bp    Location:228073..200661   Strand:-
>bmy_11992
ATGTCTCAGCCGCCGCCGCCGCCTCCGCTGCCGCCGCCGCCGCCTCCGCCTCCTCCCCCAGAGGCTCCGCAGACTCCGCCGGCCCTGGCGGCGGCGGCGGCTGCTCCGGGGGTGCTCTCGAAGCGGAGAGACCGGAGAATCCTCTCCGGGAGCTGCCCGGATCCGAAGTGCCAGGCGCGTCTGTTCTTCCCGGCCTCCGGTTCTGTCAGCATCGAGTGTACCGAGTGCGGACAGCGGCACGAGCAGCAACAGCTGCTGGGGGTGGAGGAGGTGACCGACCCGGACGTAGTGCTGCACAACCTGCTTCGGAACGCGCTGCTCGGGGTGACAGGGGCACCCAAGAAGAACACGGAATTGGTAAAGGTGATGGGCCTTTCCAACTACCACTGCAAGTTGCTGTCGCCCATCTTAGCTCGCTACGGAATGGACAAGCAGACAGGCCGGGCTAAGCTTCTCCGGGACATGAACCAGGGCGAACTGTTCGATTGCGCTTTACTGGGGGACCGCGCCTTCCTCATCGAACCAGAGCATGTGAACACGGTGGGCTATGGCAAGGACCGCTCCGGAAGCCTCCTGTATTTGCATGACACGCTTGAGGACATCAAGCGGGCCAATAAAAGTCAGGAGTGCCTCATTCCAGTGCATGTGGACGGGGATGGACACTGCCTGGTGCATGCTGTGTCCCGGGCTCTAGTAGGCCGGGAGCTCTTCTGGCATGCCTTGAGAGAGAATCTTAAACAGCACTTTCAGCAGCACCTGGCCCGATATCAAGCCCTGTTCCATGACTTCATTGATGCCGCTGAGTGGGAGGACATTATCAACGAGTGTGACCCACTGTTTGTACCACCCGAGGGTGTTCCCTTGGGCCTGAGGAACATCCACATATTCGGCCTTGCCAACGTGCTGCATCGCCCTATTATTCTGTTAGATTCACTCAGTGGCATGCGAAGCTCTGGTGATTATTCAGCCACCTTTCTGCCAGGGCTTATCCCTGCAGAGAAGTGCACTGGGAGAGATGGTCATTTGAACAAACCCATCTGTATTGCCTGGAGTAGCTCTGGTAGAAACCATTATATCCCCTTGGTAGGCATAAAAGGGGCTGCTTTGCCCAAACTGCCAATGAATTTGCTTCCTAAAGCATGGGGTGTGCCTCAGGACCTCATTAAGAAGTACATCAAACTTGAGGAGGACGGTGGTTGTGTTATTGGAGGAGACAGAAGTTTGCAGGATAAATACTTACTTAGGCTTGTTGCTGCTATGGAAGAAGTCTTTATGGACATACACGGTATCCATCCTAGTTTGGTGGCTGACGTCCATCAGTATTTCTACAGGAGGACAGGGGTGATAGGAGTTCAGCCTGAGGAAGTCACAGCAGCTGCTAAAAAAGCAGTAATGGATAATCGCCTTCACAAATGTTTGCTCTGTGGTGCCCTTTCTGAACTTCATGTTCCTCCAGAGTGGTTGGCTCCAGGAGGGAAACTGTATAACCTGGCGAAAAGTACTCATGGACAGCTGAGGCCTGACAAAAATTATAGCTTTCCCTTGAACAATTTGGTTTGCTCATATGATTCAGTGAAAGATGTTCTGGTACCAGACTACGGATTGAGTAACCTGACAGCTTGTAATTGGTGCCATGGCACATCTGTGCGAAGAGTCAGAGGAGATGGGTCTATTGTGTATTTGGATGGGGACAGAACTAATGCTAGGTCCACTGGTGGCAAATGTGGTTGTGGATTCAAACATTTTTGGGATGGTAAAGAGTATGACAATCTACCAGAAGCTTTTCCTATTACTTTGGAATGGGGTGGAAGAGTGGTCAGAGAAACAGTATATTGGTTCCAGTATGAAAGTGATGCGTCTTTGAATAGTAATGTTTACGATGTTGCCATGAAACTTGTTACCAAGCACTTTCCAGGTGAATTTGGGAGTGAAATCCTAGTTCAGAAAGTTGTCCACACTATATTGCATCAGACTGCCAAAAAGAATCCTGATGATTATACTCCTGTAAATATAGATGGTGCTCATGCCCAAAGAGTTGGAGACGTACAAGGACAAGAGTCGGAGTCCCAGCTCCCAACTAAAATTATTCTTACTGGACAGAAAACAAAAACTTTGCACAAGGAGGAGTTAAACATGAGTAAGACTGAAAGAACTATTCAACAGAATATTACGGAACAGGCTTCTGTAATGCAGAAACGGAAAACAGAGAAGTTAAAACAAGAACAAAAGGGGCAGCCCAGGACTGTTTCTCCCAGTACCGTTCGTGATGGTCCTTCCTCTGCACCTGCCACCCCTACCAAGGCTCCCTATTCACCAACCACTTCTAAGGAGAAGAAGATCCGAATAACAACTAATGATGGACGACAGTCCATGGTTACACTTAAGTCTTCAACAACGTTTTTTGAACTTCAGGAAAGCATAGCCAGAGAATTCAACATTCCTCCATATTTACAATGTATTCGATATGGCTTTCCTCCTAAAGAGTTAATGCCACCCCAGGCAGGAATGGAAAAGGAGCCAGTTCCTTTACAGCATGGTGACAGAATTACAATAGAGATTCTAAAAAGTAAAGCCGAAGGGGGTCAGTCTGCGGCAGCACACTCGGCCCACACTGTGAAACAAGAAGAGAGTGCTGTCACTGGTAAACTGTCATCTAAGGAACTTCAGGAGCAAGCTGACAAAGAAATGTACTCCTTGTGTCTTTTAGCAACGTTAATGGGAGAAGATGTATGGTCTTATGCAAAGGGGCTTCCTCACATGTTCCAGCAGGGTGGCGTATTCTACAATATTATGAAGAAAACCATGGGTATGGCTGATGGCAAGCATTGCACTTTTCCACATCTGCCTGGCAAAACCTTTGTCTATAATGCTTCTGAAGATAGGCTGGAGCTGTGTGTGGATGCTGCAGGACATTTCCCCATCGGTCCTGATGTTGAAGATTTAGTCAAAGAGGCTGTAAGTCAGGTTCGAGCAGAGGCTACGACAAGAAGTAGGGAGTCAAGTCCCTCACATGGGTTATTAAAACTAGGTAGTGGTGGAGTAGTGAAAAAGAAATCCGAGCAGCTTCATAATGTAACTGCCTTTCAGGGAAAAGGGCATTCTCTAGGAACTGCATCCAGTACCCCACACCTTGAGCCAAGAGCTAGGGAAACTCCAGTTGTGAGGAAGCAGACCACAGGGACACACTTTAGTAGTTCCATTAAAACAGAGCCTTCTGTATTCACAGCTGCTCCTAGTAACAGTGAGCTTATTCGAATAGCTCCTGGAGTAGTTACAATGAGAGACAGCAGGCAGCTTGATCCTGATATGGTTGAGGCCCAGCGAAAAAAATTGCAGGAAATGGTTTCTTCTATTCAGGCGTCGATGGACAAGCACTTGCGGGATCAAAGCACAGAGCAGTCACCGTCTGATCTTCCTCAGAGGAAAGTYGAAGTTGTGAGTTCTTCTGTGAAATCTGGGACTCTTCAGACTGGCTTACCTGAATCTTTTTCTCTAACTGGTGGCACTGAAAATTTGAACACGGAAACAACTGATGGCTGTGTGGCAGAGGCAGTGGGAGCAGCATTTGCTACAAGGTCAAAAGCACAAAAGGGAAACTCCATGGAGGAGCCTGAAGAGATGGATAGTCAAGATGCTGAGATGACAAACACAACTGAGCCAATGGATCACTCTTGA

Related Sequences

bmy_11992T0 Protein

Length: 1225 aa      View alignments
>bmy_11992T0
MSQPPPPPPLPPPPPPPPPPEAPQTPPALAAAAAAPGVLSKRRDRRILSGSCPDPKCQARLFFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVFMDIHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVPPEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDSVKDVLVPDYGLSNLTACNWCHGTSVRRVRGDGSIVYLDGDRTNARSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDASLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPDDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNITEQASVMQKRKTEKLKQEQKGQPRTVSPSTVRDGPSSAPATPTKAPYSPTTSKEKKIRITTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQHGDRITIEILKSKAEGGQSAAAHSAHTVKQEESAVTGKLSSKELQEQADKEMYSLCLLATLMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLELCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGTASSTPHLEPRARETPVVRKQTTGTHFSSSIKTEPSVFTAAPSNSELIRIAPGVVTMRDSRQLDPDMVEAQRKKLQEMVSSIQASMDKHLRDQSTEQSPSDLPQRKVEVVSSSVKSGTLQTGLPESFSLTGGTENLNTETTDGCVAEAVGAAFATRSKAQKGNSMEEPEEMDSQDAEMTNTTEPMDHS*