Part of scaffold_687 (Scaffold)

For more information consult the page for scaffold_687 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPS5 ENSTTRG00000017152 (Bottlenosed dolphin)

Gene Details

COP9 signalosome subunit 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016258, Bottlenosed dolphin)

Protein Percentage 95.27%
cDNA percentage 95.27%
Ka/Ks Ratio 0.34141 (Ka = 0.0328, Ks = 0.096)

COPS5 ENSBTAG00000002784 (Cow)

Gene Details

COP9 signalosome complex subunit 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003609, Cow)

Protein Percentage 94.91%
cDNA percentage 92.73%
Ka/Ks Ratio 0.15251 (Ka = 0.0342, Ks = 0.224)

COPS5  (Minke Whale)

Gene Details

COP9 signalosome subunit 5

External Links

Gene match (Identifier: BACU011120, Minke Whale)

Protein Percentage 95.27%
cDNA percentage 95.27%
Ka/Ks Ratio 0.32902 (Ka = 0.0324, Ks = 0.0986)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 828 bp    Location:538183..521185   Strand:-
>bmy_11999
ATGGCGGCTTCCGGGAGTGGTATGGCCCAGAAAACGTGGGAATTAGCCAACAACATGCAGGAAGCCCAGAGTATCGATGAAATCTACAAATACGACAAGAAACAGCAGCAAGAAATTCTGGCGGCGAAGCCCTGGACTAAGGATCACCATTACTTTAAGTACTGCAAAATCTCAGCATTGGCTCTACTGAAAATGGTGATGCATGCCAGATCAGGAGGCAACTTGGAAGTGATGGGCTTGATGCTGGGAAAGGTGGATGGTGAAACCATGATCATTATGGACAGTTTTGCTTTGCCTGTAGAGGGCACTGAAACCCGAGTAAATGCTCAGGCTGCTGCATATGAGTACATGGCCGCATACATAGAAAATGCCAAACAGGTCGGCCGCCTTGAAAATGCAATTGGCTGGTATCATAGCCACCCTGGCTATGGCTGCTGGCTTTCTGGGATYGATGTTAGTACTCAGATGCTCAATCAGCAGTTCCAGGAACCATTTGTAGCCGTGGTATGCTCTCTGCCTAATGCTACCTCCTCGTTCTCAACATATCCACACTATAGACTCATATATTATGCCTTAGAAGTCTCATATTTCAAATCCTCTTTGGATCGCAAATTGCTTGAGCTTTTGTGGAATAAATACTGGGTGAATACGCTGAGTTCCTCTAGCTTGCTTACTAATGCAGACTATACCACYGGTCAGGTCTTTGATTTGTCTGAAAAATTAGAACAGTCAGAAGCCCAGCTGGGACGAGGGAGTTTCATGTTGGGTCTAGAAACACATGATCGAAAGTCAGAAGACAAACTTGCCAAAGCTACACGAGACAGGTAA

Related Sequences

bmy_11999T0 Protein

Length: 276 aa      View alignments
>bmy_11999T0
MAASGSGMAQKTWELANNMQEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVCSLPNATSSFSTYPHYRLIYYALEVSYFKSSLDRKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSEDKLAKATRDR*