Sequence detailsbmy_12003 (Coding sequence)

Part of scaffold_687 (SequenceType object (1))

For more information consult the page for scaffold_687 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARFGEF1ENSTTRG00000017156 (Bottlenosed dolphin)

Gene Details

ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016262, Bottlenosed dolphin)

Protein Percentage 95.79%
cDNA percentage 95.23%
Ka/Ks Ratio 0.14932 (Ka = 0.0082, Ks = 0.0552)

ARFGEF1ENSBTAG00000014691 (Cow)

Gene Details

brefeldin A-inhibited guanine nucleotide-exchange protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019553, Cow)

Protein Percentage 97.84%
cDNA percentage 94.83%
Ka/Ks Ratio 0.06204 (Ka = 0.0117, Ks = 0.1885)

ARFGEF1 (Minke Whale)

Gene Details

ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)

External Links

Gene match (Identifier: BACU011123, Minke Whale)

Protein Percentage 99.69%
cDNA percentage 99.33%
Ka/Ks Ratio 0.04974 (Ka = 0.0011, Ks = 0.0223)

Additional orthologs identified in other species via the OPTIC pipeline.

ARFGEF1 (Human)   Arfgef1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5577 bp    Location:752633..661367   Strand:-
Raw sequence 
>bmy_12003
ATGAGAGTCCTGTGCCTTATCAACTGTTCCAAGGAAATAAAAGCGGAAACTGAAAAGCAGAGTCCTCCTCATGGAGAAGCAAAAGCTGGATCAAGCACCCTTCCACCAGTGAAATCAAAGACAAATTTTATCGAAGCAGACAGGTACTTCCTGCCCTTTGAATTGGCATGCCAGTCCAAGTGTCCCCGCATAGTGAGTACATCTCTAGATTGTTTACAGAAACTTATTGCTTATGGGCATTTGACTGGCAATGCTCCAGATAGTACAACACCAGGCAAAAAATTAATTGATAGAATTATTGAAACAATTTGTGGCTGTTTCCAAGGTCCTCAAACAGATGAAGGAGTTCAATTACAAATAATAAAGGCTTTACTTACTGCAGTAACATCTCAACACATAGAAATTCACGAAGGAACTGTACTGCAAGCTGTGAGAACATGTTACAATATCTATCTAGCAAGCAAAAATCTCATCAATCAGACAACAGCCAAAGCTACTCTTACTCAGATGCTAAATGTTATCTTTGCACGCATGGAAAACCAAGCAAATTTGAAAGATATCGATTGCTATCATCCTCATGAAAGTGTTTATGAATTGATATTTTTATTGCTCTCAAGCTTAGTAGATGAGTGTAATGTAGATATCAAGTTACCTAATTTGATCTATTCTGACATTTGGCAAGGTGACATAAGAACATGCTACAGAAAGTTGCAGGAAGCCAAACAAATGGAAAAAGAAAGGCATCGACAGCATCATCATCTGTTGCAGTCTCCAGTAAGCCATCATGAGCCTGAATCACCTCAACTTAGATATTTGCCGCCTCAGACTGTTGATCATATATCCCAGGAGCATGAAGGGGACCTTGATCCCCATTCACATGATGTGGATAAAAGCCTTCAGGATGATACAGAACCTGAAAATGGATCTGATACTTCCAGTGCAGAAAATGAACAAACTGAAGCTGATCAGGCAGCTGCAGCCGAAACATTATCTAAAAATGATGTATTATATGATGGAGAAAACCATGACTGTGAGGAAAAGCCACGAGACATCGTGCAGAGCATTGTAGAAGAAATGGTGAACGTCATCGTTGGAGATATGGGAGAAAGGACTACCATAAATGCAAGTGCAGATGGCAACATTGGAACCATAGAGGATGGTAGTGACAGTGAAAATATTCAAGCAAATGGAATTCCAGGAACACCAATTTCTGTTGCATATACACCGTCCTTACCTGATGACAGATTGTCTGTCTCTTCCAATGATACTCAGGAATCTGGAAATTCTTCAGGACCTTCACCTGGTGCTAAGTTTTCCCACATTTTACAAAAGGATGCCTTTCTAGTATTCAGGTCAYTGTGTAAACTGTCAATGAAACCACTGTCGGATGGACCACCAGATCCAAAGTCTCATGAGTTACGATCCAAGATACTTTCATTGCAGTTACTTCTATCCATTCTGCAGAATGCAGGACCTATTTTCAGGACAAATGAGATGTTTATTAATGCTATTAAGCAGTATCTGTGTGTTGCACTCTCAAAAAATGGAGTTTCTTCTGTTCCAGAGGTTTTTGAGCTTTCCCTTTCCATATTTCTTACTTTGTTGTCAAACTTCAAGACGCATCTGAAGATGCAGATTGAGGTGTTCTTTAAAGAAATTTTCCTATACATTTTGGAGACTTCTACCAGCTCATTTGACCACAAATGGATGGTTATTCAGACGTTGACAAGGATTTGTGCAGATGCTCAGAGTGTAGTGGATATTTATGTAAACTATGATTGTGACTTAAATGCAGCAAACATATTTGAAAGACTAGTAAATGATCTATCAAAAATTGCTCAAGGACGAGGCAGTCAAGAACTCGGTATGAGTAATGTTCAGGAACTGAGCCTGAGGAAAAAAGGTTTAGAATGCTTAGTGTCAATTTTGAAGTGTATGGTTGAATGGAGTAAGGATCAGTATGTGAATCCCAACTCTCAGACAACTCTTGGTCAGGAAAAACCCTCAGAGCAGGAGACGAGTGAAGTGAAACACCCTGAGACAATAAACAGATACGGAAGTTTAAATTCCCTGGAGTCAACATCATCATCAGGAATAGGCAGCTACAGCACACAGATGTCTGGCACTGATAATCCAGAACAATTTGAAGTCCTAAAGCAGCAAAAAGAAATAATAGAACAAGGGATAGATTTATTTACTAAGAAACCAAAGAGAGGAATACAGTACCTCCAAGAACAAGGGATGCTTGGCACTACACCTGAAGATATTGCCCAATTCTTACATCAGGAGGAAAGATTAGACTCTACTCAAGTGGGTGAATTCCTGGGAGATAATGATAAATTTAACAAAGAAGTCATGTATGCATATGTGGACCAACATGACTTTTCAGGAAAGGATTTTGTTTCAGCCCTTCGTATGTTTCTGGAAGGATTCCGTCTTCCAGGGGAAGCTCAGAAAATTGATCGATTGATGGAAAAGTTTGCTGCAAGATACCTAGAATGCAACCAAGGACAAACCCTTTTTGCTAGTGCAGATACTGCGTATGTTCTGGCTTATTCAATTATCATGCTCACCACAGATCTTCACAGCCCACAGGTTAAAAATAAAATGACAAAGGAACAGTACATTAAGATGAATAGAGGTATCAATGACAGTAAAGATCTTCCTGAAGAGTATCTATCAGCCATCTATAATGAAATAGCTGGAAAAAAGATATCAATGAAAGAAACAAAAGAACTAACAATCCCTACAAAATCAAGTAAACAAAATGTAGCCAGTGAAAAACAAAGAAGACTTCTGTATAACTTAGAAATGGAACAGATGGCCAAGACAGCTAAAGCACTCATGGAGGCCGTGAGCCACGTTCAAGCACCTTTCACAAGTGCGACACATTTGGAGCACGTGAGACCTATGTTTAAGTTGGCTTGGACCCCTTTTCTGGCTGCATTCAGTGTGGGTCTACAAGACTGTGATGATACTGAAGTAGCCTCTCTTTGCCTGGAAGGTATAAGATGTGCAATCAGAATTGCATGCATTTTCAGCATTCAGCTGGAAAGAGATGCATATGTCCAGGCGCTAGCAAGATTTACCTTACTTACAGTGAGTTCTGGGATTACTGAAATGAAACAGAAGAACATTGACACAATTAAAACACTTATCACAGTGGCTCATACAGATGGAAATTATCTAGGAAATTCATGGCATGAGATTCTGAAGTGCATCAGTCAGTTGGAGCTTGCACAACTTATAGGAACTGGAGTGAAACCTCGGTACATTTCTGGAACAGTGCGAGGCAGAGAAGGATCTCTTACTGGAACAAAAGATCAGGCTCCTGATGAATTTGTGGGTCTAGGGCTAGTTGGAGGAAATGTGGACTGGAAACAGATAGCAAGTATTCAGGAATCCATTGGAGAGACCAGTTCTCAGAGTGTCGTCGTCGCCGTAGATAGAATATTTACAGGGTCCACAAGGCTAGATGGAAATGCTATTGTGGATTTTGTCCGTTGGCTCTGTGCTGTGTCTATGGATGAATTACTTTCCACTACACATCCAAGAATGTTTAGTCTACAAAAAATAGTAGAAATATCATATTACAACATGGGAAGAATAAGATTGCAGTGGTCTCGAATTTGGGAAGTTATTGGAGATCATTTTAATAAGGTTGGCTGTAATCCTAATGAAGATGTAGCTATTTTTGCAGTAGACTCCTTGAGGCAATTATCAATGAAGTTCTTAGAGAAAGGGGAGCTTGCTAATTTCAGATTCCAGAAGGATTTCTTAAGACCTTTTGAACATATAATGAAACGGAACAGGTCTCCAACAATTCGAGATATGGTTGTACGGTGTATAGCACAGATGGTTAATTCTCAAGCTGCTAACATTCGGTCTGGATGGAAGAACATTTTCTCTGTATTTCATCTAGCAGCATCCGATCAAGATGAAAGCATAGTTGAACTTGCATTCCAAACAACGGGGCATATTGTCACCCTTGTGTTTGAAAAACACTTTCCAGCAACCATTGATTCTTTCCAGGATGCAGTGAAATGTTTGTCTGAATTTGCATGCAATGCAGCTTTCCCAGACACAAGTATGGAAGCAATTCGACTTATTCGCCATTGTGCAAAATATGTGTCTGATAGACCTCAGGCTTTCAAGGAATACACAAGCGACGACATGAATGTGGCACCTGAAGACAGGGTGTGGGTGAGGGGATGGTTCCCAGTTCTCTTCGAGTTGTCCTGTGTCATCAACAGATGCAAGTTAGATGTAAGAACCAGGGGTTTAACAGTAATGTTTGAAATAATGAAAACTTATGGCCACACTTATGAAAAACACTGGTGGCAGGATTTATTTAGAATTGTTTTCAGAATCTTTGACAACATGAAATTGCCAGAACAGCAGACAGAGAAAGCTGAGTGGATGACAACGACATGTAATCATGCGCTTTATGCTATCTGCGATGTGTTCACCCAGTATTTAGAAGTACTCAGTGATGTACTTTTGGATGACATTTTTGCCCAGCTCTACTGGTGTGTGCAGCAAGACAATGAGCAGTTAGCACGATCTGGTACAAACTGCTTAGAGAATGTTGTTATTCTGAATGGTGAAAAATTTACCCTAGAAATCTGGGATAAAACTTGTAACTGCACACTGGACATCTTCAAAACCACAATTCCACATGCGCTCTTGACGTGGCGTCCTGCTTCTGGAGAAGCTGCTCCCACACCTCCGTCTCCTGTGAGTGAAAAACAGCTGGATACARTATCACAGAAATCTGTAGATATTCATGATTCTATTCAGCCAAGATCTGCAGATAATAGACAGCAAGCTCCATTGGCTTCTGTCTCTACTATGAATGAAGAAGTCAGCAAAATTAAACCCACAGCAAAATTTCCAGAACAAAAATTGTTTGCCGCCCTGTTGATTAAATGTGTTGTGCAGCTGGAACTCATCCAGACCATCGACAGCATCGTGTTCTTCCCCGCCACAAATGCCGTGGACTTTGACGTTCGAGTTGATACTCAGGACCAAGGAATGTATCGCTTTCTAACATCGCAACAACTCTTCAAGCTGCTGGACTGCTTGTTGGAGTCACACAGATTTGCAAAAGCATTTAACTCCAACAATGACCAGAGGACGGCTCTGTGGAAGGCGGGCTTCAAGGGCAAATCCAAACCCAACCTTCTGAAGCAGGAGACGAGCAGCCTGGCCTGCGGGCTGCGCATTCTCTTCCGGATGTACACGGACGAGAGCCGGGCCAGCGCCTGGGAGGAGGTCCAGCAGAGGCTTTTAAATGTCTGCAGCGAAGCCCTGAGCTACTTCCTTACCCTAACATCAGAAAGTCATCGGGAAGCCTGGACTAACTTACTGCTTTTGTTTCTAACTAAAGTCCTGAAGATCAGCGACAATAGGTTTAAAGCTCACGCATCATTCTACTACCCTCTCTTATGTGAAATTATGCAATTTGACTTGATTCCTGAACTTCGTGCTGTTCTTAGAAGATTTTTTCTGCGAATTGGAGTAGTTTTTCAGATATCACAACCACCTGAACAGGAACTTGGAATAAACAAGCAATGA

Related Sequences

bmy_12003T0 SequenceType object (3)

Length: 1859 aa      View alignments
>bmy_12003T0
MRVLCLINCSKEIKAETEKQSPPHGEAKAGSSTLPPVKSKTNFIEADRYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDSTTPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYNIYLASKNLINQTTAKATLTQMLNVIFARMENQANLKDIDCYHPHESVYELIFLLLSSLVDECNVDIKLPNLIYSDIWQGDIRTCYRKLQEAKQMEKERHRQHHHLLQSPVSHHEPESPQLRYLPPQTVDHISQEHEGDLDPHSHDVDKSLQDDTEPENGSDTSSAENEQTEADQAAAAETLSKNDVLYDGENHDCEEKPRDIVQSIVEEMVNVIVGDMGERTTINASADGNIGTIEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPIFRTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQETSEVKHPETINRYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFTKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQNVASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFPVLFELSCVINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPASGEAAPTPPSPVSEKQLDTXSQKSVDIHDSIQPRSADNRQQAPLASVSTMNEEVSKIKPTAKFPEQKLFAALLIKCVVQLELIQTIDSIVFFPATNAVDFDVRVDTQDQGMYRFLTSQQLFKLLDCLLESHRFAKAFNSNNDQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDESRASAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQELGINKQ*