Part of scaffold_705 (Scaffold)

For more information consult the page for scaffold_705 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POLR3E ENSTTRG00000010514 (Bottlenosed dolphin)

Gene Details

polymerase (RNA) III (DNA directed) polypeptide E (80kD)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009980, Bottlenosed dolphin)

Protein Percentage 82.7%
cDNA percentage 83.28%
Ka/Ks Ratio 0.24602 (Ka = 0.0246, Ks = 0.0998)

POLR3E ENSBTAG00000018044 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043258, Cow)

Protein Percentage 89.9%
cDNA percentage 90.42%
Ka/Ks Ratio 0.20657 (Ka = 0.0622, Ks = 0.3009)

POLR3E  (Minke Whale)

Gene Details

polymerase (RNA) III (DNA directed) polypeptide E (80kD)

External Links

Gene match (Identifier: BACU013835, Minke Whale)

Protein Percentage 94.41%
cDNA percentage 95.3%
Ka/Ks Ratio 0.42076 (Ka = 0.0391, Ks = 0.0929)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2259 bp    Location:638785..607226   Strand:-
>bmy_12038
ATGGCCAATGAAGAGGATGACCCAGTCATACAGGAGATCGACGTGTACTTGGCCAAAAGTCTGGCAGAGAAGCTCTATCTGTTTCAGTACCCTGTGCGTCCAGTCTCGATGACCTATGATGACATTCCGCACCTCTCAGCCAGGATCAAGCCCAAGCAGCAGAAGGTGGAGCTTGAGATGGCCATCGACACGCTGAATCCCAACTATTGCCGCAGCAAAGGGGAGCAGATCGCGCTGAACGTGGACGGGGCCTGCGCTGACGAGACCGGCACTTACTCCTCGAAGCTGATGGACAAGCAGACGTTCTGCTCTTCCCAGACCACCAGTAACACGTCCCGTTATGCTGCCGCACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCAGATGCCAAGCACCGTGAGAGGGAGGCAGCCAACGAGGCGGGAGACTCTTCACAGGACGAGGCAGAAGAAGATGTGAAGCAGATCACGGTGCGGTTCTCCCGGCCTGAGTCGGAGCAGGCCCGCCAGCGCCGCGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCATGCAGAGGAGCCCTGGGTCCACCTGCACTACTACGGCCTGAGGGACAGCCGCTCTGAGCATGAGCGCCAGTACCTGCTGTGCCAGGGCTCCAGCGGGGTTGAGAACACAGAGCTTGTCAAGTCACCCAGTGAGTACCTCATGATGCTGATGCCTCCCAGCCAGGAGGAGGAGAAAGACAAACCCGTGGCCCCCAGCAATGTCCTGTCCATGGCCCAGCTGCGCACCCTGCCCCTAGCTGATCAGATCAAGATCCTGATGAAGAATGGCTTCAACCTCACCCGTGCTTGGGGTCTGTCTGCATCCCAGTCCCTGACCCCTCCTGCCTCAGCTCACACTGCTCCCCCCTTCCGTTTCAGCCAGCGTGACATCCTGTACCCCAAGGACTCTTCTAGCCCTCACAGCGGCGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTTGTTATGTGGAAGTTCACGCAGAGCCGGTGGGTGGTAAGGAAAGAGGTGGCAGCGGTGACTAAAGTAAGTGAAGTTCTTCTTGGTCCGAGACCCGGCCCCACTACTGGAGGAATGGGGGCTGGGTGGGGCTTTCGGGCTGGGCTTGCCTCACCTTTGGCCCCCTCTCCCCAGCTCTGCGCGGAAGACGTGAAGGACTTTCTGGAGCACATGGCCGTAGTGAGGATCAACAAGGGCTGGGAGTTCATACTGCCTTATGACGGGGAGTTCATCAAGAAGCATCCAGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGCATCCAGGCCAAATTAGAAAAAGTTTATAATCTTGTGAAGGAAACCATGCCAAAGAAGCCGGATGGACAATCAGGGCCTGCCGGGCTGGTCTCTGGGGACCAGCGGGTCCAAGTCGCCAAAAGACAGGCCCAGCAGAACCACGCGCTGCTGGAGCGGGAGCTGCAGCGGAGGAAGGAGCAGCTGCGGGCGGCCTCGGTCCTGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGGGAGGAGGAGGAGGAGCGGGGCGCGGAGGAGGCCGAGGAGCCCATGGACACCTCGCCCAGCGGTGGCCTCCACGGCAGGCTGGCCAACGGGCTGCCTGCTGGGCGGGCGGCAGGCGGGGACGGCTTCATCGGGCACCCGCCCTCAGGCTCTGCCGGCACCCCCGTGGCCCGGGAACTGAGGGCCTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAACCTGCACTTGGCCAGCCTGCCCCCCGGCCACATGCTCTTCAGCGGCATCTCAGACCGCATGCTGCAGGACACGGTGCTGGCTGCCGGCTGCAAGCAGATACTGGTGCCTTTTCCCCCACAGACGGCTGCTTCCCCGGATGAGCAGAAGGTGTTCGCCCTCTGGGAGTCTGGAGACATGAGTGACCAGGTGATTGTTTCCCATAATAACATGTTTTTGCTACTAAAGCATCGACAGGTTTTGCTTGAAATTTTTTCCAAAAATTACCGGGTACGCCGGAACATGATCCAGTCTCGGCTGACTCAAGAGTGTGGAGAAGATCTGAGTAAACAGGAGTTGGATAAAGTGCTAAAGGACTGCTGTGTAAGCTATGGTGGCATGTGGTACCTTAAAGGGACAGTACAGTCTTGA

Related Sequences

bmy_12038T0 Protein

Length: 753 aa      View alignments
>bmy_12038T0
MANEEDDPVIQEIDVYLAKSLAEKLYLFQYPVRPVSMTYDDIPHLSARIKPKQQKVELEMAIDTLNPNYCRSKGEQIALNVDGACADETGTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQGELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRPESEQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCQGSSGVENTELVKSPSEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNGFNLTRAWGLSASQSLTPPASAHTAPPFRFSQRDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQSRWVVRKEVAAVTKVSEVLLGPRPGPTTGGMGAGWGFRAGLASPLAPSPQLCAEDVKDFLEHMAVVRINKGWEFILPYDGEFIKKHPDVVQRQHMLWTGIQAKLEKVYNLVKETMPKKPDGQSGPAGLVSGDQRVQVAKRQAQQNHALLERELQRRKEQLRAASVLPGVRIKEEPVSEEGEEEEERGAEEAEEPMDTSPSGGLHGRLANGLPAGRAAGGDGFIGHPPSGSAGTPVARELRAFVEATFQRQFVLTLSELKRLFNLHLASLPPGHMLFSGISDRMLQDTVLAAGCKQILVPFPPQTAASPDEQKVFALWESGDMSDQVIVSHNNMFLLLKHRQVLLEIFSKNYRVRRNMIQSRLTQECGEDLSKQELDKVLKDCCVSYGGMWYLKGTVQS*