Sequence detailsbmy_12041 (Coding sequence)

Part of scaffold_705 (SequenceType object (1))

For more information consult the page for scaffold_705 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SDR42E2ENSTTRG00000010495 (Bottlenosed dolphin)

Gene Details

short chain dehydrogenase/reductase family 42E, member 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009960, Bottlenosed dolphin)

Protein Percentage 87.01%
cDNA percentage 87.55%
Ka/Ks Ratio 0.31208 (Ka = 0.0149, Ks = 0.0477)

SDR42E2ENSBTAG00000013052 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017350, Cow)

Protein Percentage 91.99%
cDNA percentage 92.68%
Ka/Ks Ratio 0.15993 (Ka = 0.0365, Ks = 0.2283)

SDR42E2 (Minke Whale)

Gene Details

short chain dehydrogenase/reductase family 42E, member 2

External Links

Gene match (Identifier: BACU013837, Minke Whale)

Protein Percentage 74.07%
cDNA percentage 78.0%
Ka/Ks Ratio 0.57707 (Ka = 0.23, Ks = 0.3986)

Additional orthologs identified in other species via the OPTIC pipeline.

SDR42E2 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1848 bp    Location:742995..725845   Strand:-
Raw sequence 
>bmy_12041
ATGAAGCCCAACCTGGCAGGCTCCTCCCCAGAGGCCTGCAAAGCTGCAGGGCAGGGCGAGCAGAGTTGCCCTGTCTGCCAGGCCTGGGGTGGGGTCTCAAGCCTGGGGTCTGAGTCAGGGCCTGGGCCGGGGCCTGGTGCTGTGTCCAGACCTGGGCCGGGGCCTGGTGTGGTTCTAGAACCTGGACCAGGGCCTGCTGCTGTGTCCAGACCTGGGCTGGGGCCTGGTGCTGTGTCAGGACCTGGACCTGGGCCTGGTACTGTTCCGGGGCCTGGGCTGGGGCCTGGTGTGGTTCTAGAACCTGGATCAAGGCCTGGTGCTGCTTCAGGAGCTGGGCCAGGGACTGGAGCAGTGTCAGGGCCTGGGAAGGAGCCTAGTGCTGTTCTGGGACCCAGACAAGGGCCTGGCGCAGTGTTGGGGCCTGGACCAGGGCCTGGTGCTGCTTCAGCGCCTGGACCAGCTCTGGGGCCTGGGCCAGGAGCTGGGTCAGTACCTGGTTCAGGAGCTGCACCTTTATCTGGGTCAGGAGTAGGGCCTGGGCCCAGACGGGAATCAGGGGCTGGGCAGAAACCCAGTGAGCCCGTGACAGCCCCCATGCCGGCACTGCAGCAGAAGACTCGGGCCACACCTGTGCAGGCCTCTCAGCAGAAGGTTCTGGTGACTGGAGGAGGAGGCTACCTGGGCTTTAGCCTGGGTTCCAGCCTGGCCAAGAGCGGCACTWCTGTCATCCTGCTCGACCTCCGCAGACCCCAGTGGGTGCTGTGCCCGGGGACCGAGTTCATCCAGGCTGATGTCCGCGATGCAGAAGCCCTGCACCGCGCCTTCGAAGGGGTGGACTGCGTCTTCCACATGGCCTCCTGCGGAATGTCTGGTGCCGAGCAGCTGCAAAAAGAGCAGATTGAGTCTATAAATGTTGGAGGCACCAAACTAGTGATTGATGTTTGTGTCCACCGGCGGGTTCCCAGGCTTGTCTACACCAGCACCGTCAATGTCGCATTCGGCGGGAAGCCCATAGAACAGGGCGATGAGGACTCTGTACCATATTTCCCACTGGAGAAGGTACCTGGCTTCCAGGAGAGGTGGGCGGGGCCAATGGACTTGGAACCCACAGTCCAAAGGCACATGGACCACTACTCCCGAACCAAAGCCATTGCCGACCAGTTGATCCTCATGGCCAACGGGATGCCTCTCCCAGGAGGAGGTGCTCTGCGGACATGTGTGCTCCGGCCCCCAGGGATCTACGGCCCCGAAGAGCAGAGGCACCTGCCCCGCGTGGTGAAGAGACTGTTCATGTTCCGATTTGGGGACCGCAGGACGAGGATGAACTGGGTCCACGTGTGCAATCTGGTGCAGGCACACGTGCTAGCAGCCGAGGCCCTCACCGCCGCCAAGGGCTACGTGGCCAGTGGGCAGGCGTACTACATCAATGACGGGGAGAGCGTCAACCTCTTCGAGTGGATGGCCCCACTGTTTGAGAAGCTGGGGTACAGCAAGCCCTGGATCCAGGTTCCTACTTCCTGGGTTTACCTGTCAGCCACGGTGATGGAGTATTTGCACCTGGCCCTGAAGCCCATCTGCAGCCTCCCGCCGCTGCTCACCCGGAGTGAGGTGCGCAGCGTGGCCGTGACGCACACCTTCCAGATCGCTAAGGCCCGCGCTCAGCTTGGCTACGTGCCCGACAAGTTCAGCTTCGCGGACGCCGTGGAGCGATACGTGCAGTCGACGGGCCGGGGAACCCGCGGCTCCACAGCGCGGACGCTCCTGCGGCTGCTGCTCGGGTTGCTGCTGCTTCTTGGCCTGCTCGTGCTGGCCCTGCACTTCCTAGGCCCGCGGCCGTTCGTCGTCTGA

Related Sequences

bmy_12041T0 SequenceType object (3)

Length: 616 aa      View alignments
>bmy_12041T0
MKPNLAGSSPEACKAAGQGEQSCPVCQAWGGVSSLGSESGPGPGPGAVSRPGPGPGVVLEPGPGPAAVSRPGLGPGAVSGPGPGPGTVPGPGLGPGVVLEPGSRPGAASGAGPGTGAVSGPGKEPSAVLGPRQGPGAVLGPGPGPGAASAPGPALGPGPGAGSVPGSGAAPLSGSGVGPGPRRESGAGQKPSEPVTAPMPALQQKTRATPVQASQQKVLVTGGGGYLGFSLGSSLAKSGTXVILLDLRRPQWVLCPGTEFIQADVRDAEALHRAFEGVDCVFHMASCGMSGAEQLQKEQIESINVGGTKLVIDVCVHRRVPRLVYTSTVNVAFGGKPIEQGDEDSVPYFPLEKVPGFQERWAGPMDLEPTVQRHMDHYSRTKAIADQLILMANGMPLPGGGALRTCVLRPPGIYGPEEQRHLPRVVKRLFMFRFGDRRTRMNWVHVCNLVQAHVLAAEALTAAKGYVASGQAYYINDGESVNLFEWMAPLFEKLGYSKPWIQVPTSWVYLSATVMEYLHLALKPICSLPPLLTRSEVRSVAVTHTFQIAKARAQLGYVPDKFSFADAVERYVQSTGRGTRGSTARTLLRLLLGLLLLLGLLVLALHFLGPRPFVV*