Part of scaffold_711 (Scaffold)

For more information consult the page for scaffold_711 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCRN4L ENSTTRG00000013558 (Bottlenosed dolphin)

Gene Details

CCR4 carbon catabolite repression 4-like (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012866, Bottlenosed dolphin)

Protein Percentage 60.22%
cDNA percentage 58.93%
Ka/Ks Ratio 0.05531 (Ka = 0.0151, Ks = 0.2722)

CCRN4L ENSBTAG00000005998 (Cow)

Gene Details

nocturnin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007876, Cow)

Protein Percentage 94.74%
cDNA percentage 90.21%
Ka/Ks Ratio 0.04155 (Ka = 0.0229, Ks = 0.5515)

CCRN4L  (Minke Whale)

Gene Details

CCR4 carbon catabolite repression 4-like (S. cerevisiae)

External Links

Gene match (Identifier: BACU004168, Minke Whale)

Protein Percentage 78.19%
cDNA percentage 82.09%
Ka/Ks Ratio 0.61223 (Ka = 0.1878, Ks = 0.3068)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1089 bp    Location:501756..506718   Strand:+
>bmy_12056
ATGGGCAACGGCACGAGCAGGCTCTACAGCGCTCTCACCAAGACCCTCGACGGCAGCCCCGCCGCCCAGCACCCGGAGTATCTGGTGGCGCCCGACCCGGAACATCTGGAGCCCATTGACCCTAAAGAGCTCCTTGAGGAGTGCAGGGCCGTCCTGCACACCCGGCCTCCCCGCTTCCAGAGGGGTTTCGTGGATCTGAGGGCCGACGGCCCCAGTAGTAGCCACACGCCTATCCGGGTCATGCAGTGGAACATCCTCGCCCAAGCTCTTGGAGAAGGCAAAGACAACTTTGTACAGTGCCCTCTTGAAGCACTCAAGTGGGAAGAGAGGAAATGTCTCATCCTGGAAGAAATCCTAGCCTACCAGCCCGACATACTATGCCTGCAAGAGGTGGACCACTACTTTGACACCTTCCGCCCCCTCCTCGGTAGACTGGGCTATCAGGGCACGTTTTTCCCCAAGCCCTGGTCACCTTGTCTGGACGTGGAACACAACAACGGACCAGATGGCTGTGCCTTGTTCTTTCTCCAAAACCGATTCAAGCTCGTCAACAGTGCCAACATCAGGCTGACGGCCATGACGTTGAAAACCAACCAGGTGGCCATTGCCCAGACCCTAGAGTGCAAGGAGTCCAGCCGGCAGTTCTGCATCGCCGTCACCCACCTGAAGGCTCGCACGGGCTGGGAGCGATTTCGATCAGCTCAAGGCTGTGACCTTCTCCAGAACCTGCAGAACATCACCCAGGGAGCCAAGATTCCCCTTATCGTTTGTGGGGACTTCAACGCAGAGCCAACAGAGGAGGTCTACAGACACTTCGCGTCCTCCAGCCTCAACCTGAACAGCGCCTACAAGCTGCTGAGCGCGGACGGGCAGTCGGAACCTCCGTACACGACCTGGAAGATCCGGACCTCGGGCGAGAGCCGGCACACTCTGGATTATATCTGGTATTCCAAGCATGCGCTCAGCGTGAGGTCAGCCCTGGCTCTGCTCACCGAGGAACAGATTGGACCCAACCGACTACCGTCCTTCAATTACCCTTCAGACCACCTGTCCCTAGTGTGTGACTTTAGCTTTAACGAGGARCCTTGA

Related Sequences

bmy_12056T0 Protein

Length: 363 aa      View alignments
>bmy_12056T0
MGNGTSRLYSALTKTLDGSPAAQHPEYLVAPDPEHLEPIDPKELLEECRAVLHTRPPRFQRGFVDLRADGPSSSHTPIRVMQWNILAQALGEGKDNFVQCPLEALKWEERKCLILEEILAYQPDILCLQEVDHYFDTFRPLLGRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLKARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYRHFASSSLNLNSAYKLLSADGQSEPPYTTWKIRTSGESRHTLDYIWYSKHALSVRSALALLTEEQIGPNRLPSFNYPSDHLSLVCDFSFNEEP*