Sequence detailsbmy_12075 (Coding sequence)

Part of scaffold_703 (SequenceType object (1))

For more information consult the page for scaffold_703 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VGFENSTTRG00000004753 (Bottlenosed dolphin)

Gene Details

VGF nerve growth factor inducible

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004476, Bottlenosed dolphin)

Protein Percentage 89.92%
cDNA percentage 90.25%
Ka/Ks Ratio 0.27452 (Ka = 0.0084, Ks = 0.0305)

VGFENSBTAG00000009868 (Cow)

Gene Details

Neuroendocrine regulatory peptide-2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013014, Cow)

Protein Percentage 92.73%
cDNA percentage 93.41%
Ka/Ks Ratio 0.23534 (Ka = 0.0392, Ks = 0.1665)

VGF (Minke Whale)

Gene Details

VGF nerve growth factor inducible

External Links

Gene match (Identifier: BACU012059, Minke Whale)

Protein Percentage 92.76%
cDNA percentage 93.57%
Ka/Ks Ratio 0.58951 (Ka = 0.0416, Ks = 0.0706)

Additional orthologs identified in other species via the OPTIC pipeline.

VGF (Human)   Vgf (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1818 bp    Location:95848..93306   Strand:-
Raw sequence 
>bmy_12075
ATGAAATCGCTCAGGTTGCCGGCTCCTGTCCTCCTCTGCTTCCTTCTACTGACCAAGGGGTTGGGAGCAGCGCCCCCGGGGCACCCTGAGGTTCAGCCACCTCCCCCCAGCTCTGAGCATGAAGAGCCAGTAGCTGGGGACGCAGTACTCGGGCCGAAGGGTGTTAGCGCCCCAGAGGTCCGAGCCGCTAGAAATTCAGAGCCGCAGGACGAGGAAGAGCTTTTCCAGGGCGTGGATCCCCGGGCGCTGGCCGCGGTGCTGCTGCAGGCACTCGACCGCCCGGCCTCGCCCCCAGCGCCTGGCGGCTCCCAGCAGCGGCCAGAGGAAGAAGCAGCAGAAGCTCTGCTGACCGAGACCGTGCGCAGCCAGACCCACAGTCTCCCAGCGCCAGAGACCCAGGCGCCCGCGGCCCCGCCTCGCCCTCAGACTCAGGAGAATGGTCCCGAGGCGGCCGACCCCTCCGAGGAGCTCGAGGCGCTAGCTTCCCTGCTTCAGGAACTGCGAGATTTCAGTCCGAGCAGTGCCAAGCGCCAGCAAGAGACGGCGGCAGCAGAGACGGAAACCCGCACGCACACGCTGACCCGAGTCAACCTGGAGAGCCCCGGGCCGGAGCGCGTGTGGCGGGCTTCCTGGGGAGAGTTCCAGGCGCGCGTCCCGGAGCGCGCGGCCCTGCCGCCGCCTGCTCCCCCGCAATTCCAGGCGCGTATGCCCGAGAGCGGGCCCCTTCCCGAAGCCCACCAGTTCGGGGAAGGAGTGTCCTCCCCCAAAACACACCTAGGTGAGGCATTGGCACCCTTGTCCAAGGCGTACCAAGGCCTGGGCGCTCCCTTTACCAAGGCGCGCCGGCCGGAGACCACACTCCTGGGCGGCTCTGAGGCGGGAGAGCGCCTTCTACAGCAAGGGCTGGCGCAGGTGGAAGCCGGGCGGCGGCAGGCGGAGGCCACACGGCAGGCCGCGGCCCAGGAAGAGCGGCTGGCCGACCTCGCCTCAGACCTGCTGCTCCAGTATTTGCTGCAGGGCGGGGCTCGGCAGCGCGGCCTGGGGGGTCGGGGGCTGCAGGAGGAGGCGGAGCAGGAGAGACGCGGCGGGGAGGAGAGGGTGGGGGAAGAGGATGAGGAGGCGGCGGAGGCGGAGGCGGAGGCGGAGGAGGCGGAGAGGGCGCGACAGAACGCTTTACTGTTCGCTGAGGAGGAGGACGGGGAAGCCGGAGCCGAAGACAAGCGCTCCCAGGAGGAGACGCCCGGCCACCGACGAAAGGAGGCCGAGGGGGCAGAGGAGGGCGGGGAGGAGGACGACGACGACGAAGAGATGGACCCGCAGACAATCGATAGCCTCATTGAGCTGTCCACCAAACTCCACCTGCCAGCGGACGACGTGGTCAGCATCATCGAGGAGGTGGAAGAGAAGCGGAAGCGGAAGAAGAACGCCCCTCCCGAGCCTGTGCCGCCCCCCCGGGCCGCCCCCGTCCCCACTCACGCCCGCTCCCCGCAGCCCCAGCCCCTCTCCCCCGCCCCGGCTCGGGACGAGCTGCCCGACTGGAACGAGGTGCTCCCGCCCTGGGATCGGGAGGAGGACGAGGTGTTTCCCCCGGGGCCCTACCACCCTTTTCCCAACTACATCCGGCCGCGAACACTGCAGCCACCCGCTGCCTCGCGCCGCCGCCACTACCACCACGCCCTGCCGCCTTCGAGCCACTATCCCGACAGGGAGGCCCAGGCGCGGCGCGCTCAGGAGCAGGCGGAGGCAGAGGAGCGCCGGCTGCAGGAGCAGGAGGAGCTGGAGAATTACATCGAGCACGTGCTGCTCAGGCGCCCGTGA

Related Sequences

bmy_12075T0 SequenceType object (3)

Length: 606 aa      View alignments
>bmy_12075T0
MKSLRLPAPVLLCFLLLTKGLGAAPPGHPEVQPPPPSSEHEEPVAGDAVLGPKGVSAPEVRAARNSEPQDEEELFQGVDPRALAAVLLQALDRPASPPAPGGSQQRPEEEAAEALLTETVRSQTHSLPAPETQAPAAPPRPQTQENGPEAADPSEELEALASLLQELRDFSPSSAKRQQETAAAETETRTHTLTRVNLESPGPERVWRASWGEFQARVPERAALPPPAPPQFQARMPESGPLPEAHQFGEGVSSPKTHLGEALAPLSKAYQGLGAPFTKARRPETTLLGGSEAGERLLQQGLAQVEAGRRQAEATRQAAAQEERLADLASDLLLQYLLQGGARQRGLGGRGLQEEAEQERRGGEERVGEEDEEAAEAEAEAEEAERARQNALLFAEEEDGEAGAEDKRSQEETPGHRRKEAEGAEEGGEEDDDDEEMDPQTIDSLIELSTKLHLPADDVVSIIEEVEEKRKRKKNAPPEPVPPPRAAPVPTHARSPQPQPLSPAPARDELPDWNEVLPPWDREEDEVFPPGPYHPFPNYIRPRTLQPPAASRRRHYHHALPPSSHYPDREAQARRAQEQAEAEERRLQEQEELENYIEHVLLRRP*