Part of scaffold_703 (SequenceType object (1))

For more information consult the page for scaffold_703 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLOD3ENSTTRG00000004781 (Bottlenosed dolphin)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004507, Bottlenosed dolphin)

Protein Percentage 98.6%
cDNA percentage 97.66%
Ka/Ks Ratio 0.07454 (Ka = 0.0062, Ks = 0.0837)

PLOD3ENSBTAG00000000342 (Cow)

Gene Details

procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000447, Cow)

Protein Percentage 96.11%
cDNA percentage 94.03%
Ka/Ks Ratio 0.0714 (Ka = 0.0175, Ks = 0.2451)

PLOD3 (Minke Whale)

Gene Details

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

External Links

Gene match (Identifier: BACU012055, Minke Whale)

Protein Percentage 99.22%
cDNA percentage 99.17%
Ka/Ks Ratio 0.15027 (Ka = 0.0034, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1929 bp    Location:126036..118046   Strand:-
>bmy_12078
ATGGCCTCGGGCCCGGGACTCCGGCTCCTGCTGCTACTGCTGCTACTGCTGTCGCCGCCTCCTGAGGCCTCGGCTTCAAATCGTCCCCGGGGCAGCGACCCTGTCAACCCAGAGAAGCTGCTGGTGATCACCGTGGCCACAGGCGAGACAGAAGGATACCGGCGTTTCCTGCGGTCAGCGGAGTTTTTCAACTACACTGTGCGGACCCTGGGCTTGGGACAGGAGTGGCGAGGGGGCGATGTAGCCCGAACGGTTGGTGGAGGACAGAAGGTCAGGTGGCTAAAGAAGGAAATGGAGAAATATGCAGACAGGGAAGATATGGTCATCATGTTTGTGGACAGCTACGATGTGATTCTGGCTGGCAGCCCCTCGGAGCTGCTGAAGAAGTTTGTCCAGAGTGGCAGCCGCCTGCTCTTCTCTGCAGAGGGCTTCTGCTGGCCCGAGTGGGGGCTGGCRGAGCAGTACCCTGAGGTGGGCACGGGGAAGCGCTTCCTCAACTCTGGTGGATTCATTGGCTTCGCCCCCGCTATCCACCAAATTGTCCGCCAGTGGAAGTACAAAGATGACGATGATGATCAGCTGTTCTACACTCGGCTCTACCTGGACCCAGGACTGAGGGAGAAACTCAGCCTTAATCTGGATCATAAATCGCAGATCTTTCAGAACCTCAACGGGGCTTTAGATGAGGTGGTTTTAAAGTTTGGTCGGAATCGCGTGCGTATCCGGAATGTGGCCTATGACACACTTCCTGTTGTGGTCCATGGGAACGGCCCCACTAAGCTCCAGCTGAATTACCTGGGAAACTACGTCCCCAATGGCTGGACTCCTGAGGGAGGCTGTGGGTTCTGCGACCAGGACCGGAGGCCACTCCCGGGGGGGCAGACTCCCCCCCGGGTGCTTCTGGCAGTGTTTGTGGAACAACCTAGCCCGTTCCTGCCCCGCTTCCTCCAGCGGCTGCTGCTCCTGGACTATCCCCCCGACAGGGTCACCCTCTTCCTGCACAACAACGTGATGGCGCCCATGCTGTCCCGCCACGGGAAGCTGTGGTCCAATTTCTGGGGAGCCCTGAGCCCCGATGAGTACTATGCACGCTCCGAGGACTACGTGGAGCTGGTGCAGCGGAAGCGAGTGGGCGTGTGGAATGTGCCCTACATATCCCAGGCCTATGTGATCCGCGGGGAGACCCTGAGGACGGAGCTGCCCCAGAGGGAGGTGTTCTCGGGCAGTGACACTGACCCAGACATGGCTTTCTGCAAGAGCCTACGGGATAAGGGCATCTTTCTCCACCTCAGCAATCAGCACGAATTTGGGCGCCTCCTGGCCACTTCCCGGTATGACACAGACCACCTGCACCCTGACCTCTGGCAGATCTTCGACAACCCCCTGGACTGGAAGGAGCAGTACATTCACGAGAACTACAGCCGCGCCCTGGAAGGGGAGGGGTTCGTGGAACAGCCCTGCCCGGACGTGTACTGGTTCCCTCTGCTGTCTGAGCAAATGTGTGATGAGCTGGTGGAGGAAATGGAGCACTACGGCCAGTGGTCAGGAGGCCGGCATGAGGTGGGCTATGAGGACCAGTGGCTGCAGCTGCTGAGGACGTACGTGGGGCCCATGACCGAGAGCCTGTTCCCAGGCTACCACACCAAGACCCGGGCGGTGATGAACTTTGTGGTCCGCTACCGGCCAGATGAGCAGCCCTCTCTGCGGCCACATCACGACTCATCCACCTTCACCCTCAATGTCGCCCTCAACCACAAGGGCCTGGATTATGAGGGAGGTGGCTGCCGCTTCCTGCGCTACGACTGTGTGGTGTCGTCCCCCCGGAAGGGCTGGGGGCTCCTGCACCCTGGCCGCCTCACCCACTACCACGAGGGGCTGCCCACCACTCGGGGCACTCGCTACATCATGGTGTCCTTTGTCGACCCCTGA

Related Sequences

bmy_12078T0 SequenceType object (3)

Length: 643 aa      View alignments
>bmy_12078T0
MASGPGLRLLLLLLLLLSPPPEASASNRPRGSDPVNPEKLLVITVATGETEGYRRFLRSAEFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYADREDMVIMFVDSYDVILAGSPSELLKKFVQSGSRLLFSAEGFCWPEWGLAEQYPEVGTGKRFLNSGGFIGFAPAIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHKSQIFQNLNGALDEVVLKFGRNRVRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPEGGCGFCDQDRRPLPGGQTPPRVLLAVFVEQPSPFLPRFLQRLLLLDYPPDRVTLFLHNNVMAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGETLRTELPQREVFSGSDTDPDMAFCKSLRDKGIFLHLSNQHEFGRLLATSRYDTDHLHPDLWQIFDNPLDWKEQYIHENYSRALEGEGFVEQPCPDVYWFPLLSEQMCDELVEEMEHYGQWSGGRHEVGYEDQWLQLLRTYVGPMTESLFPGYHTKTRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVVSSPRKGWGLLHPGRLTHYHEGLPTTRGTRYIMVSFVDP*