Sequence detailsbmy_12082 (Coding sequence)

Part of scaffold_703 (SequenceType object (1))

For more information consult the page for scaffold_703 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RABL5ENSTTRG00000005871 (Bottlenosed dolphin)

Gene Details

RAB, member RAS oncogene family-like 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005551, Bottlenosed dolphin)

Protein Percentage 91.35%
cDNA percentage 93.87%
Ka/Ks Ratio 0.37332 (Ka = 0.0475, Ks = 0.1273)

BT.48915ENSBTAG00000014343 (Cow)

Gene Details

rab-like protein 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019073, Cow)

Protein Percentage 89.73%
cDNA percentage 89.55%
Ka/Ks Ratio 0.18657 (Ka = 0.0583, Ks = 0.3124)

Additional orthologs identified in other species via the OPTIC pipeline.

RABL5 (Human)   Rabl5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 645 bp    Location:220808..195995   Strand:-
Raw sequence 
>bmy_12082
ATGCCATATGATCCAAAGTTAGCAGCTCTGAGGAACGAGTCGGGGCTGAAGAAAGCAAATACACAAAGGTGGAGCAGCCAAAAGACGTCAGGAAACAACGATCTTTCACTGTCTTCACTTTCACAGAGTGGAAAAACCGTTTTGGCCAACTTCCTGACAGAATCTTCTGACATCACTGAATACAACCCAACCCAAGGAGTGAGGATCCTGGAATTTGAGAACCCACACGTTACCAGCAACGACAAAAGCACGGGGTGTGAATTTGAGCTCTGGGACTGTGGTGGCGATCCAAAGTTCGAGTCTTGCTGGCCAGCCCTGATGAAGGACTCTCACGGGGTGGTGATCGTCTTCAATGCTGACATCCCAAGCCACCTGAAGGAAATTGAGATGTGGTATTCCTGCTTCGTCCAGCAGCAGTTTTTACAGGATACTCAATGTCTGTTAATTGCACACCACAAACCAGGCTGTGGAAGTGACAAAGGAAACCTGGCTTTGGCGCCACCCTTGAACAAGCTGAAGCTGGTGCACTCAAATCTTGAGGATGACCCAGAAGAGATCAGAATGGAGTTCATAAAGTATTTAAGAAGCATAATCAACTCAGTGTCTGAGAGCAGAGACCGGGAGGAGATGTCAATTATCACCTAA

Related Sequences

bmy_12082T0 SequenceType object (3)

Length: 215 aa      View alignments
>bmy_12082T0
MPYDPKLAALRNESGLKKANTQRWSSQKTSGNNDLSLSSLSQSGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNDKSTGCEFELWDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDTQCLLIAHHKPGCGSDKGNLALAPPLNKLKLVHSNLEDDPEEIRMEFIKYLRSIINSVSESRDREEMSIIT*