Sequence detailsbmy_12107 (Coding sequence)

Part of scaffold_708 (SequenceType object (1))

For more information consult the page for scaffold_708 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.72793ENSBTAG00000001500 (Cow)

Gene Details

fidgetin-like protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001962, Cow)

Protein Percentage 87.3%
cDNA percentage 89.41%
Ka/Ks Ratio 0.22575 (Ka = 0.0629, Ks = 0.2786)

FIGNL1 (Minke Whale)

Gene Details

fidgetin-like 1

External Links

Gene match (Identifier: BACU007397, Minke Whale)

Protein Percentage 96.31%
cDNA percentage 96.41%
Ka/Ks Ratio 0.20404 (Ka = 0.0174, Ks = 0.0851)

Additional orthologs identified in other species via the OPTIC pipeline.

FIGNL1 (Human)   Fignl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2034 bp    Location:410019..412052   Strand:+
Raw sequence 
>bmy_12107
ATGCAGGTCTCTAGCTCCAGGTCTGTACACTTGAGTGAATGGCAGAAGAATTACTTTGCTGTTACGTCTGGCACGTGTACGTCAGGAGAGAAGGCAGACGCGTACCGAGCACAGATTCTCCGCGTTCAGTACGCGTGGGCAAACTCTGAGGTCTCCCAGGTGTGTGCTGGCAGACTGTTCAGGATATATGCGGAGAAGTACTCTGCAGTTACTGACTCCGACAGTGCGGAAACCGGCTTGAATAACTATGCAGAAAACATTTTAACTCTAGCAAGGTCTCGGCAAACTGACAGTGACAAGTGGAAGTCTGGATTGTCAATAAATAATGTGTTCAAAATGAGTAACGTTCAGGAGATGATGCATGCTGGCAGAAAATCCAGAGACTCTCTTTTGGCACCCGTTGATGAGTCAGTAGTCATCCATAAAGTGGGCGCTGTCTCTGATCTTCCTAAATTGAGTGTTTGTGGTGGTTCTGGGGAGAGTGACCCATTAACTAACTCAGCCCATGGTGCCGATAGGACCAAAGACTTCCCAGAGGGCAGTCCTTCTTTGAAGTGCCCGCAGAATGCCCAGCCACCTCTGGTCACTGACACCACTAAGCCGTGTCCTGCAGTCTCAGGACCTTTCGGTGAGTCAGCCACTGCAAAATTCCATGCCACACCATTATTTGGAAATGTCAAAAAGGAAAATTACAACTTCCCRAAAGCCAACATAGGACTAAATGTGTTCTCATCTAATCAGTCTTGTTTTCCTTCTGGCTTTGAAAATCCACGGGAAATGAAAGCTTTTTATGGTTCTGGCACCATTGATGCACTTTCCACTCCAGTAATGAATAAGGCTTTTAGTAAAACAGAAGATAATGGCCAAAGAGAGGAGAGCAGCCTGCCTACTTTTAAAACTGCAAAAGAACAGCTATGGGTAGATCAGCAGAAAAAGTACCACCAGCCCCAGCGTGCATCAGGGTCTTCACATGGTGGTGTCAAAAAGTCTCTGGGAGCTAGTAGATCCCGAGGGATATTTGGAAAGTTTGTTCCCCCCGTACCTAAGCAAGATGGGGGAGGTCAGGGCRGGGGGACACAGTATAAGCCTCATGGCGCAGGAGCTGCAGACCCAGCACATCCCGTGGATGAGCGTCTGAAGAACTTGGAGCCCAAAATGATTGAACTTATTATGCATGAGATTATGGATCAGGGACCGCCAGTGAATTGGGAAGATATCGCAGGAGTGGAATTTGCCAAAACCACAATAAAGGAGATAGTTGTGTGGCCCATGATGCGGCCAGACATCTTCACTGGCTTACGAGGACCCCCTAAAGGAATTCTGCTTTTTGGTCCTCCTGGGACTGGTAAAACTCTGATTGGCAAGTGCATCGCTAGTCAGTCTGGGGCAACATTCTTTAGTATCTCTGCTTCCTCCTTGACTTCTAAGTGGGTGGGCGAGGGGGAGAAAATGGTCCGTGCACTGTTTGCTGTTGCACGATGTCAGCAACCGGCTGTGATATTTATTGATGAAATTGATTCCCTGTTATCTCAGCGGGGAGATGGTGAGCATGAATCTTCTAGAAGGATGAAAACCGAGTTCCTAGTTCAGTTGGATGGAGCAGCCACATCTTCTGAAGATCGTATTCTAGTGGTAGGAGCAACCAATCGGCCACAGGAGATTGACGAGGCTGCCCGGAGAAGGCTGGTGAAAAGGCTGTATATTCCCCTCCCAGAGGCTTCAGCCAGGAAACAGATAGTCGTTAATCTGATGTCCGAGGAGCACTGCTGCCTCAGTGAGGAGGAGGTCGACCTGGTGGTGCAGCACTCTGGTGGGTTCTCGGGGGCTGACATGACGCAGCTCTGCAGGGAGGCGTCTCTGGGTCCTATTCGCAGTTTACAGGCTGCCGACATTGCCACGGTAACGCCGGATCAAGTTCGACCAATAGCTTACAGTGACTTTGAAGATGCCTTCAGAACTGTGCGACCTAGTGTGTCTCCAGAAGATTTAGAGCTTTATGAAAACTGGAACAGGACTTTTGGTTGTGGAAAGTAA

Related Sequences

bmy_12107T0 SequenceType object (3)

Length: 678 aa      View alignments
>bmy_12107T0
MQVSSSRSVHLSEWQKNYFAVTSGTCTSGEKADAYRAQILRVQYAWANSEVSQVCAGRLFRIYAEKYSAVTDSDSAETGLNNYAENILTLARSRQTDSDKWKSGLSINNVFKMSNVQEMMHAGRKSRDSLLAPVDESVVIHKVGAVSDLPKLSVCGGSGESDPLTNSAHGADRTKDFPEGSPSLKCPQNAQPPLVTDTTKPCPAVSGPFGESATAKFHATPLFGNVKKENYNFPKANIGLNVFSSNQSCFPSGFENPREMKAFYGSGTIDALSTPVMNKAFSKTEDNGQREESSLPTFKTAKEQLWVDQQKKYHQPQRASGSSHGGVKKSLGASRSRGIFGKFVPPVPKQDGGGQGXGTQYKPHGAGAADPAHPVDERLKNLEPKMIELIMHEIMDQGPPVNWEDIAGVEFAKTTIKEIVVWPMMRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRMKTEFLVQLDGAATSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVVNLMSEEHCCLSEEEVDLVVQHSGGFSGADMTQLCREASLGPIRSLQAADIATVTPDQVRPIAYSDFEDAFRTVRPSVSPEDLELYENWNRTFGCGK*