Part of scaffold_714 (Scaffold)

For more information consult the page for scaffold_714 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAG2 ENSTTRG00000014073 (Bottlenosed dolphin)

Gene Details

Recombination activator protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013341, Bottlenosed dolphin)

Protein Percentage 98.47%
cDNA percentage 98.53%
Ka/Ks Ratio 0.21066 (Ka = 0.0067, Ks = 0.0318)

RAG2 ENSBTAG00000031309 (Cow)

Gene Details

V(D)J recombination-activating protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039446, Cow)

Protein Percentage 94.65%
cDNA percentage 94.14%
Ka/Ks Ratio 0.15824 (Ka = 0.0267, Ks = 0.1685)

RAG2  (Minke Whale)

Gene Details

recombination activating gene 2

External Links

Gene match (Identifier: BACU008912, Minke Whale)

Protein Percentage 98.28%
cDNA percentage 98.85%
Ka/Ks Ratio 0.3266 (Ka = 0.0071, Ks = 0.0219)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1572 bp    Location:62511..64082   Strand:+
>bmy_12111
ATGGTAACAGTCGGTAATAACATAGCCTTAATTCAACCAGGCTTCTCATTAATGAATTTTGATGGGCAAGTTTTCTTCTTTGGCCAAAAAGGCTGGCCCAAAAGGTCCTGCCCCACTGGAGTTTTCCATTTTGATGTAAAGCATAACCATCTCAAACTGAAGCCTGCAGTTTTCTCTAAGGATTCCTGCTACCTTCCTCCTCTTCGTTACCCAGCCACTTGCACATTCAAAGGCAACTTAGAGTCTGAAAAGCATCAGTACATCATCCATGGAGGGAAAACACCAAACAACGAGCTTTCAGATAAGATTTATATCATGTCTGTTGTTTGCAAGAACAACAAAAAAGTTACTTTTTGCTGCACAGAGAAAGACTTGGTAGGAGATGTTCCTGAAGGCAGGTATGGTCATTCCATTGATGTAGTGTATAGTCGCGGAAAAAGTGTGGGTGTTCTCTTTGGAGGACGGTCATACATACCTTCCGCCCAAAGAACCACAGAAAAATGGAACAGTGTAGCTGACTGCCTGCCCCACGTTTTCTTGGTGGATTTTGAATTTGGGTGCTCTACGTCATACATTCTTCCAGAACTTCAGGATGGGCTATCTTTTCACGTCTCCATTGCCAGAAATGATACCGTTTATATTTTAGGAGGCCATTCACTTGCCAATAACAYCCGCCCTGCCAATCTATACAGAATAAGGGTTGATCTCCCTCTGGGTAGCCCAGCTGTGAATTGCACAGTCATGCCAGGAGGAATCTCTGTCTCCAGTGCAATCCTGACTCAAATAAGCAATGATGAATTTGTTATCATTGGTGGCTATCAGCTTGAAAATCAAAAAAGAATGGTCTGCAACATCATCTCTTTCGAGGACAACAAGATGGAAATTCGTGAGATGGAAACCCCAGATTGGACCCCAGATATTAAGCACAGCAAGATATGGTTTGGAAGCAACATGGGAAATGGAACTATTTTCCTCGGCATACCAGGAGACAATAAACAGGTTGTTTCAGAAGCATTCTATTTCTATATGTTGAAATGCGCTGAAGACGCTGTGAATGAAGATCAGAAAACATTCACAAATAGTCAGACATCAACAGAAGACCCAGGGGACTCCACTCCCTTTGAAGACTCAGAAGAATTTTGTTTCAGTGCAGAAGCAAATAGTTTTGATGGTGATGATGAATTTGACACCTATAATGAAGATGATGAAGAAAATGAGTCTGAAACGGGCTATTGGATTACATGCTGCCCTACTTGTGATGTGGATATCAACACTTGGGTACCATTTTATTCAACTGAGCTCAACAAACCTGCCATGATTTACTGCTCTCATGGAGATGGGCATTGGGTCCATGCCCAGTGTATGGATCTGGCAGAAAGCACACTCATCCATCTGTCAGAAGGAAGCAACAAATATTATTGCAATGAGCATGTGGAGATAGCAAGAGCACTGCAAACCCCCAAAAGAGTTCTACCCTTAAAAAAGCCTCCACTAAAGTCCCTCCACAAAAAGGGTTCTGGGAAAATTATTACTCCTGCCAAGAAATCCTTTCTTAGAAGGTTGTTTGATTAG

Related Sequences

bmy_12111T0 Protein

Length: 524 aa      View alignments
>bmy_12111T0
MVTVGNNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDVKHNHLKLKPAVFSKDSCYLPPLRYPATCTFKGNLESEKHQYIIHGGKTPNNELSDKIYIMSVVCKNNKKVTFCCTEKDLVGDVPEGRYGHSIDVVYSRGKSVGVLFGGRSYIPSAQRTTEKWNSVADCLPHVFLVDFEFGCSTSYILPELQDGLSFHVSIARNDTVYILGGHSLANNXRPANLYRIRVDLPLGSPAVNCTVMPGGISVSSAILTQISNDEFVIIGGYQLENQKRMVCNIISFEDNKMEIREMETPDWTPDIKHSKIWFGSNMGNGTIFLGIPGDNKQVVSEAFYFYMLKCAEDAVNEDQKTFTNSQTSTEDPGDSTPFEDSEEFCFSAEANSFDGDDEFDTYNEDDEENESETGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLAESTLIHLSEGSNKYYCNEHVEIARALQTPKRVLPLKKPPLKSLHKKGSGKIITPAKKSFLRRLFD*