Part of scaffold_714 (Scaffold)

For more information consult the page for scaffold_714 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM44 ENSTTRG00000000686 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 44

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000644, Bottlenosed dolphin)

Protein Percentage 72.34%
cDNA percentage 72.34%
Ka/Ks Ratio 0.24237 (Ka = 0.0286, Ks = 0.1179)

TRIM44 ENSBTAG00000037389 (Cow)

Gene Details

Tripartite motif-containing protein 44

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051946, Cow)

Protein Percentage 93.79%
cDNA percentage 92.8%
Ka/Ks Ratio 0.1127 (Ka = 0.0306, Ks = 0.2711)

TRIM44  (Minke Whale)

Gene Details

tripartite motif containing 44

External Links

Gene match (Identifier: BACU008904, Minke Whale)

Protein Percentage 93.66%
cDNA percentage 94.28%
Ka/Ks Ratio 0.50532 (Ka = 0.0498, Ks = 0.0986)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location:841578..774705   Strand:-
>bmy_12116
ATGGCCTCCGGAGGGGGCGCGGCCTTCGAGGAGCTGCCGCACGACGGCACGTGTGATGAGTGTGAGCCCGACGAGGCTCCGGGAGCCGAGGAAGTGTGCCGGGAATGCGGCTTCTGCTACTGCCGCCGCCACGCGGAGGCGCACGGGCAGAAGTTCCCCTGGCACCACCTGGCCGAGTACGTCCACGGAGCCGCCCAGGCCTGGACCCCGGGAGCCCGGGGGGATGGGGCGGGAGAGGAAGAAGTCGAGGCCCAGGTAGAGAACGAGAAGGCCCTAGAAAGCGAGGCGGGGGAAGAGAGCGAGTCYGAGGAAGACTGTGAGTCCGAAGAAGAGAGTCAGACGGAGGAGGAGAGCGAGGACGAGAGTGATGAAGACAGTGAGGAAGACAGTGAGGAAGAAATGGAGGATGAGCAGGAGAGCGAAGCAGAGGAAGACAACCAGGACGAAGGAGAATCGGAGGCCGAGGGAGAAACTGAGGCAGAAAGCGAATTTGACCCAGAAATAGAAATGGAAGCGGAGAGAGTGGCCAAGAGGAAGTGTCCGGACCATGGGCTCGATCTGAGTACCTATTGCCAGGAAGATAAGCAGCTCATCTGTGTCCTGTGCCCAGTCATTGGGGCACACCAGGGCCACCAGCTCTCCACCCTAGATGAAGCCTTCGAAGAACTAAGAAGCAAAGATTCAGGCGGACTGAAGGCGGCTATGATAGAGTTGGTGGAAAGGTTAAAGTTCAAGAGCTCAGACCCTAAAGTAACCCGGGACCAGATGAAGGTGTTTATACAGCAGGAATTTAAGAAAGTTCAAAAAGTGATTGCTGATGAGGAGCAGAAGGCCCTTCATTTAGTGGACATCCAGGAAGCAATGGCCACGGCTCATGTGACTGAGATACTGGCAGACATCCAGTCCCATATGGATAGATTGATGACTCAGATGGCCCAAGCCAAGGAGCAACTTGATACCTCTAATGAATCAGCTGAGCCAAAGGCAGAGGGCGACGAGGAAGGACCCAGATTGGCTCCTTCTGTGCTGCTGCCGGAGCCTGCTGAGAAGTAA

Related Sequences

bmy_12116T0 Protein

Length: 351 aa      View alignments
>bmy_12116T0
MASGGGAAFEELPHDGTCDECEPDEAPGAEEVCRECGFCYCRRHAEAHGQKFPWHHLAEYVHGAAQAWTPGARGDGAGEEEVEAQVENEKALESEAGEESESEEDCESEEESQTEEESEDESDEDSEEDSEEEMEDEQESEAEEDNQDEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLSTYCQEDKQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSDPKVTRDQMKVFIQQEFKKVQKVIADEEQKALHLVDIQEAMATAHVTEILADIQSHMDRLMTQMAQAKEQLDTSNESAEPKAEGDEEGPRLAPSVLLPEPAEK*