Part of scaffold_707 (Scaffold)

For more information consult the page for scaffold_707 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTNNA1 ENSTTRG00000001343 (Bottlenosed dolphin)

Gene Details

catenin (cadherin-associated protein), alpha 1, 102kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001265, Bottlenosed dolphin)

Protein Percentage 90.85%
cDNA percentage 91.64%
Ka/Ks Ratio 0.4397 (Ka = 0.0367, Ks = 0.0835)

BT.63787 ENSBTAG00000014182 (Cow)

Gene Details

catenin alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018863, Cow)

Protein Percentage 95.1%
cDNA percentage 92.45%
Ka/Ks Ratio 0.14493 (Ka = 0.0356, Ks = 0.2457)

CTNNA1  (Minke Whale)

Gene Details

catenin (cadherin-associated protein), alpha 1, 102kDa

External Links

Gene match (Identifier: BACU010671, Minke Whale)

Protein Percentage 13.03%
cDNA percentage 33.66%
Ka/Ks Ratio 0.21402 (Ka = 1.6561, Ks = 7.7377)

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location:184509..124695   Strand:-
>bmy_12139
ATGCGGGAGCCTTTGACCAGTTTCCTGTTTTCTGTGTCCCAGGCTTTCCGAGTAAAATTGAATCCACCAGGAAGCTTTACTGTTATAAAGCAGTGTGCTTTGAACAGTATCGGGGTCGTTGCTGGACGTAAAGAAAGAAGTGATGCACTCAATTCTGCAATAGATAAAATGACCAAGAAGACCAGGGACTTGCGTAGGCAGCTCCGCAAAGCTGTCATGGACCATGTTTCGGATTCATTTCTGGAAACCAACGTTCCACTTTTAGTATTGATTGAAGCTGCAAAGAATGGAAATGAGAAAGAAGTTAAAGAATATGCCCAAGTTTTCCGTGAACATGCCAACAAATTAATTGAGGTTGCCAACTTGGCCTGTTCCATCTCAAACAATGAAGAAGGTGTAAAGCTTGTTCGAATGTCTGCAAGCCAGCTAGAAGCCCTCTGTCCTCAGGTTATCAATGCTGCATTGGCTTTAGCAGCAAAACCACAGAGTAAACTGGCCCAAGAGAACATGGATCTTTTTAAAGAACAGTGGGAAAAACAAGTCCGAGTTCTCACAGATGCTGTCGATGACATTACTTCCATTGATGACTTCTTGGCTGTCTCAGAGAATCACATTTTGGAAGACGTGAACAAATGCGTCATTGCTCTCCAAGAGAAAGATGTGGATGGGCTGGACCGCACAGCTGGTGCAATTCGAGGCCGAGCTGCTCGGGTCATTCACGTGGTCACCTCAGAGATGGACAACTATGAGCCAGGGGTCTACACAGAGAAGGTGCTGGAAGCCACCAAGCTCCTCTCCAACACAGTCATGCCACGTTTTACCGAGCAAGTGGAAGCGGCCGTGGAAGCCCTCAGCTCGGACCCCGCCCAGCCCATGGATGAGAACGAGTTTATCGATGCCTCACGCCTGGTGTACGATGGCATCCGGGACATCAGGAAAGCGGTGTTGATGATAAGGACCCCTGAGGAGCTGGATGACTCGGACTTCGAGACGGAAGACTTCGATGTCAGAAGCAGGACAAGCGTCCAGACAGAAGACGATCAGCTGATAGCTGGCCAGAGTGCCCGGGCGATCATGGCTCAGCTTCCCCAGGAGCAAAAAGCAAAGATTGCGGAACAGGTGGCCAGCTTCCAGGAAGAAAAGAGCAAGCTGGATGCCGAAGTGTCCAAGTGGGACGACAGTGGTAATGACATCATCGTGCTGGCCAAGCAGATGTGCATGATCATGATGGAGATGACGGACTTTACCCGAGGTAAAGGACCGCTCAAAAACACATCAGATGTGATCAGTGCCGCCAAGAAAATTGCTGAGGCGGGATCCCGGATGGATAAGCTTGGCCGTACCATCGCAGACCATTGCCCAGACTCAGCCTGCAAGCAGGACCTGCTGGCCTACCTGCAGCGCATCGCCCTCTACTGCCACCAGCTCAACATCTGCAGCAAAGTCAAGGCTGAGGTGCAGAACCTCGGTGGGGAGCTGGTCGTCTCCGGGGTGGACAGCGCCATGTCCCTGATCCAAGCTGCCAAGAACTTGATGAACGCTGTGGTGCAGACAGTGAAGGCGTCCTACGTGGCCTCCACCAAATACCAGAAGTCTCAGGGGATGGCTTCCCTTAACCTCCCTGCTGTGTCGTGGAAGATGAAGGCGCCTGAGAAAAAGCCCTTGGTGAAGAGAGAGAAACAGGATGAGACACAGACCAAGATTAAGAGGGCATCTCAGAAGAAGCATGTGAACCCTGTGCAGGCCCTCAGCGAGTTCAAAGCCATGGACAGCATCTAA

Related Sequences

bmy_12139T0 Protein

Length: 593 aa      View alignments
>bmy_12139T0
MREPLTSFLFSVSQAFRVKLNPPGSFTVIKQCALNSIGVVAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI*