Sequence detailsbmy_12139 (Coding sequence)

Part of scaffold_707 (SequenceType object (1))

For more information consult the page for scaffold_707 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTNNA1ENSTTRG00000001343 (Bottlenosed dolphin)

Gene Details

catenin (cadherin-associated protein), alpha 1, 102kDa

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001265, Bottlenosed dolphin)

Protein Percentage 90.85%
cDNA percentage 91.64%
Ka/Ks Ratio 0.4397 (Ka = 0.0367, Ks = 0.0835)

BT.63787ENSBTAG00000014182 (Cow)

Gene Details

catenin alpha-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018863, Cow)

Protein Percentage 95.1%
cDNA percentage 92.45%
Ka/Ks Ratio 0.14493 (Ka = 0.0356, Ks = 0.2457)

CTNNA1 (Minke Whale)

Gene Details

catenin (cadherin-associated protein), alpha 1, 102kDa

External Links

Gene match (Identifier: BACU010671, Minke Whale)

Protein Percentage 13.03%
cDNA percentage 33.66%
Ka/Ks Ratio 0.21402 (Ka = 1.6561, Ks = 7.7377)

Genome Location

Sequence SequenceType object (2)

Length: 1779 bp    Location:184509..124695   Strand:-
Raw sequence 
>bmy_12139
ATGCGGGAGCCTTTGACCAGTTTCCTGTTTTCTGTGTCCCAGGCTTTCCGAGTAAAATTGAATCCACCAGGAAGCTTTACTGTTATAAAGCAGTGTGCTTTGAACAGTATCGGGGTCGTTGCTGGACGTAAAGAAAGAAGTGATGCACTCAATTCTGCAATAGATAAAATGACCAAGAAGACCAGGGACTTGCGTAGGCAGCTCCGCAAAGCTGTCATGGACCATGTTTCGGATTCATTTCTGGAAACCAACGTTCCACTTTTAGTATTGATTGAAGCTGCAAAGAATGGAAATGAGAAAGAAGTTAAAGAATATGCCCAAGTTTTCCGTGAACATGCCAACAAATTAATTGAGGTTGCCAACTTGGCCTGTTCCATCTCAAACAATGAAGAAGGTGTAAAGCTTGTTCGAATGTCTGCAAGCCAGCTAGAAGCCCTCTGTCCTCAGGTTATCAATGCTGCATTGGCTTTAGCAGCAAAACCACAGAGTAAACTGGCCCAAGAGAACATGGATCTTTTTAAAGAACAGTGGGAAAAACAAGTCCGAGTTCTCACAGATGCTGTCGATGACATTACTTCCATTGATGACTTCTTGGCTGTCTCAGAGAATCACATTTTGGAAGACGTGAACAAATGCGTCATTGCTCTCCAAGAGAAAGATGTGGATGGGCTGGACCGCACAGCTGGTGCAATTCGAGGCCGAGCTGCTCGGGTCATTCACGTGGTCACCTCAGAGATGGACAACTATGAGCCAGGGGTCTACACAGAGAAGGTGCTGGAAGCCACCAAGCTCCTCTCCAACACAGTCATGCCACGTTTTACCGAGCAAGTGGAAGCGGCCGTGGAAGCCCTCAGCTCGGACCCCGCCCAGCCCATGGATGAGAACGAGTTTATCGATGCCTCACGCCTGGTGTACGATGGCATCCGGGACATCAGGAAAGCGGTGTTGATGATAAGGACCCCTGAGGAGCTGGATGACTCGGACTTCGAGACGGAAGACTTCGATGTCAGAAGCAGGACAAGCGTCCAGACAGAAGACGATCAGCTGATAGCTGGCCAGAGTGCCCGGGCGATCATGGCTCAGCTTCCCCAGGAGCAAAAAGCAAAGATTGCGGAACAGGTGGCCAGCTTCCAGGAAGAAAAGAGCAAGCTGGATGCCGAAGTGTCCAAGTGGGACGACAGTGGTAATGACATCATCGTGCTGGCCAAGCAGATGTGCATGATCATGATGGAGATGACGGACTTTACCCGAGGTAAAGGACCGCTCAAAAACACATCAGATGTGATCAGTGCCGCCAAGAAAATTGCTGAGGCGGGATCCCGGATGGATAAGCTTGGCCGTACCATCGCAGACCATTGCCCAGACTCAGCCTGCAAGCAGGACCTGCTGGCCTACCTGCAGCGCATCGCCCTCTACTGCCACCAGCTCAACATCTGCAGCAAAGTCAAGGCTGAGGTGCAGAACCTCGGTGGGGAGCTGGTCGTCTCCGGGGTGGACAGCGCCATGTCCCTGATCCAAGCTGCCAAGAACTTGATGAACGCTGTGGTGCAGACAGTGAAGGCGTCCTACGTGGCCTCCACCAAATACCAGAAGTCTCAGGGGATGGCTTCCCTTAACCTCCCTGCTGTGTCGTGGAAGATGAAGGCGCCTGAGAAAAAGCCCTTGGTGAAGAGAGAGAAACAGGATGAGACACAGACCAAGATTAAGAGGGCATCTCAGAAGAAGCATGTGAACCCTGTGCAGGCCCTCAGCGAGTTCAAAGCCATGGACAGCATCTAA

Related Sequences

bmy_12139T0 SequenceType object (3)

Length: 593 aa      View alignments
>bmy_12139T0
MREPLTSFLFSVSQAFRVKLNPPGSFTVIKQCALNSIGVVAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI*